Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02729 ATGGCAAGATACTTTCTACTTATAGTGTTTCTACTATATTTGACTCTTCCTTTCATTGTTCATGCTCAGAACAACCAATCAGGCTTTATTAGTATTGATTGTGGATTTGTGGATGAACCAAGCTACATAGATGAAACTACTTCCATATATTACACTTGGGATTTCAACTTCACTGACACTGGTGTAAGCCAAAGCATATCATCAAAACACAAAACTTCCCTTGAAAGACAATTTTGGAATGTTAGAAGCTTCCAAGAAGGAACAAGGAACTGTTACACACTTTATGTTTCACAAGGAAGTAACAAGAAATATTTAGTGAGGGCTAGGTTTGTGTATGGTAATTATGATGGAAAAGACTCTCTTCCTGAGTTTGATATTTATCTTGGAGCCAAATGGTGGGAATCTGTGGTGTTTGATGATTCATTCAGTGTAATAACCAAAGAAATTATTTATGCTTCTTCCTCAGATTATGTTCATGTTTGTTTGTTGAATACTGGCAAGGGTACACCTTTTATATCAGTTTTAGAGGTTAGACTTCTTAACAGTGATGCCTATCTTGTTAACTCTCTTGAGCTTTTGGCAAGGTTTGATGTAGGCTCACAAGGTGATCAAATAATCAGATATCCAGATGATATTTATGACAGAACATGGACACCATATAACTCAATTGACTGGAAAAAGATAGATACTTCACTCACCATAGATCAAGGAGCACCTTCATACAATTTTTTACCACTACCACCCTCTACTGTCATGAGAACAACATCAATTCCATCAAATGCCAATGACAACATTGAATTTTACTTCCTTCCAAAGTATAATGCCTCAAGATATTATGTGTACTTGTACTTTGCTGAAATCATGAAGCTCAAGGAAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGGGAGCTTTTAAATAGTGTTCCTATCAATCCTTTGTACCTGCAGAGTTTGTATTATTTATCACTTATAAGTGAAAATAAGTTGGAAATTTGGTTGAATAAGACTAGTAGATCAACACTTCcaccactcttcaatgccattgagatatacatgacgaaggacttcttacaaccaGAAACATATCAAACAGATGTTGATGGTATCCTAAATGTGAAGTCAATTTATGGTATCAAGAGGAACTGGCAAGGAGATCCTTGTACTCCAGTGTCTTACTTGTGGGATGGTTTAAACTGCAGCTATGTTGGATCTGATTCACCGAGGATTATATACTTGAACTTAACTTCCAGTGGTTTAATTGGAAATATAGCTCATGGCATATCCAATCTAAAGTCAATAGAATATTTGGATTTGTCAAATAACAATTTGACTGGGGCTGTGCCTGATTTCTTATTTCAGCTCCAATTCTTGAGAGTTCTAAACCTGGAAGGAAATCAGCTATCAGGAGCAATTCCAATACAACTCCTTGTACATTCAGAAAATAGTATGCTCAAATCTAATTTTGGTGGAAATCCAAATCTTTGCTCCTCAGGTTCATGCAACAAGAGGAATGCAAATAAGATTGTAGTTCCATTAGTATCATCACTTGGTGGAGCTTTCATGATACTAGCAATAGCAATGGTTTCTTTTCACGTATACTATAAGAGACACCGAGTTTCACATCAAGTGAGCAAGGTGAGTGGTTATTCAAGAATAAAGCAGGAACTAGAGACAAAGAAACAAGAATTCAGCTATGAAGAAGTAGTAAGTATTACAAGAAACTTTGAAAAGGTTTTGGGGAAAGGAGCATCTGGAACAGTATACTATGGATGGATTGATCATGATACTGAGGTAGCTGTCAAAGTACTATCTCCATCATCAGCTCAAGGATATCTTCAATTTCAAGCAGAGGCCAAACTTTTTGCTATAGTTCGTCATAAATACTTGACTGGTCTTATAGGGTATTGTGATGATGGCACCAACATGGCTCTCATTTATGAATATATGGCTAATGGAGACTTATCTAAGCATTTATCAGATAAAAATGAAAATATATTGAGTTGGAATCAAAGACTTCAAATTGCAGTAGATGCTGCTGAAGGATTGGAGTATCTGCATCATGGATGCAATCCACCAATTGTTCACAGAGATATTAAATCAAAAAACATCTTATTGAATGAAAAAATGCAGGCAAAACTAGCTGATTTTGGGTTATCAAAGATCTTTCCTAATGAAGGTGACACTCATGTCTCCACAGTTGTTGCTGGCACGCCAGGATACCTCGATCCCGAGTACAATAGATTAGGCAAGTTGAAAGAAAAAAGTGATGTTTTCAGTTTTGGGGTAGTTTTGCTTGAGATAATTACAGGACAACCTGCAATAACCAAAACTGAAGAAAAAATTCATATTATTCAATTGGTTGGTTCAATGTTGCTTGGAAAAGAGTTAAAAGATATTGTGGATCCCACATTAGAGGGAGATTTTGATATTTACTCTGCAAAGAAAGTTTTGGATATTGCAATGGCTTGTGTAGCACCAACTTCCATTAATAGGCCAACCATGAGCCATGTAGTTATAGAACTAAAACAATGTTTGCAAAACATGACTCATCCCTCTCAATCTAATTACAATCATGAGAGTCTAGCTAGCAACTTAAGTTGTGTTTCCTTTGATAGAATCAGTGGTGAGAGCTCTCTAGAGAGGTAG 2652 0.3511 MARYFLLIVFLLYLTLPFIVHAQNNQSGFISIDCGFVDEPSYIDETTSIYYTWDFNFTDTGVSQSISSKHKTSLERQFWNVRSFQEGTRNCYTLYVSQGSNKKYLVRARFVYGNYDGKDSLPEFDIYLGAKWWESVVFDDSFSVITKEIIYASSSDYVHVCLLNTGKGTPFISVLEVRLLNSDAYLVNSLELLARFDVGSQGDQIIRYPDDIYDRTWTPYNSIDWKKIDTSLTIDQGAPSYNFLPLPPSTVMRTTSIPSNANDNIEFYFLPKYNASRYYVYLYFAEIMKLKENQIREFNIFVNGELLNSVPINPLYLQSLYYLSLISENKLEIWLNKTSRSTLPPLFNAIEIYMTKDFLQPETYQTDVDGILNVKSIYGIKRNWQGDPCTPVSYLWDGLNCSYVGSDSPRIIYLNLTSSGLIGNIAHGISNLKSIEYLDLSNNNLTGAVPDFLFQLQFLRVLNLEGNQLSGAIPIQLLVHSENSMLKSNFGGNPNLCSSGSCNKRNANKIVVPLVSSLGGAFMILAIAMVSFHVYYKRHRVSHQVSKVSGYSRIKQELETKKQEFSYEEVVSITRNFEKVLGKGASGTVYYGWIDHDTEVAVKVLSPSSAQGYLQFQAEAKLFAIVRHKYLTGLIGYCDDGTNMALIYEYMANGDLSKHLSDKNENILSWNQRLQIAVDAAEGLEYLHHGCNPPIVHRDIKSKNILLNEKMQAKLADFGLSKIFPNEGDTHVSTVVAGTPGYLDPEYNRLGKLKEKSDVFSFGVVLLEIITGQPAITKTEEKIHIIQLVGSMLLGKELKDIVDPTLEGDFDIYSAKKVLDIAMACVAPTSINRPTMSHVVIELKQCLQNMTHPSQSNYNHESLASNLSCVSFDRISGESSLER 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02729 883 ProSiteProfiles Protein kinase domain profile. 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02729 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Car01g02729 883 SUPERFAMILY Protein kinase-like (PK-like) 560 843 IPR011009 -
Car01g02729 883 Gene3D Phosphorylase Kinase; domain 1 556 650 - -
Car01g02729 883 SMART serkin_6 575 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02729 883 Gene3D Transferase(Phosphotransferase) domain 1 651 870 - -
Car01g02729 883 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 883 - -
Car01g02729 883 Pfam Malectin-like domain 32 354 IPR024788 -
Car01g02729 883 SUPERFAMILY L domain-like 373 496 - -
Car01g02729 883 CDD STKc_IRAK 581 845 - -
Car01g02729 883 PANTHER OS07G0107800 PROTEIN-RELATED 10 883 - -
Car01g02729 883 Gene3D Ribonuclease Inhibitor 372 489 IPR032675 -
Car01g02729 883 Pfam Protein tyrosine and serine/threonine kinase 577 840 IPR001245 GO:0004672|GO:0006468
Car01g02729 883 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Car01g02729 883 Pfam Leucine rich repeat 413 469 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02729 Car-Chr1 52696049 52701059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02729 4 859 Receptor kinase-like Gene Family AT2G19210 47.955 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Car01g02729 Malectin_like 8.7e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02729 - - gmx:100778537 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02729 01 52696049 52701059 Car01g02729 01 52696049 52701059 ECH