Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02721 ATGAGTCGAGAACAAAAGAAGCGAGGGAATCATGACAAAGTTTCTGATGGTGCTGAGAAGGTTATTGTTGCTGTCAAGGCATCAAAAGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTGACTCATGTTGTTCAACCCGGAGATTGCATTACATTGCTAGTTGTTGTACCTTCACAATGTTCAGGCAGAAGATTATGGGGTTTCCCTAGGTTTTCTGGTGACTGTGCTAGTGCACACAGGAAGTCAACTTCGGGAGCTAGTTCAGAGAACAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAGGATTAAAATAGTTTCTGGATCACCTTGCGGAGCAGTGGCCGCTGAAGCCAAGAAAGCTCAAGCCAATTGGGTCGTATTAGAAAAACAGCTCAAGCATGAGGAAAAACAATGCATGGAAGAGTTACAGTGCAACATTGTGGTTATGAAGCATTCCCAAGCTAAGGTACTTCGCTTGAATTTGGTTGGATCACAAAAAAAGAGTATCGAAGAAACACTTCCATTACCTTCTGAGGAGCATGAGATGAATGGAAAACAACCCAAGAAGAAGATTGGTTCTTTAAAGTCCGTAAAAGGAACAGTTGTCACGCCAACTAGCAGCCCTGAGCTAGAGACGTCATTCACAGCAACTGAAGTTGGCACTTCATCGGTGTCAAGCTCTGATCCTGGAACTTCGCCATTTTTTGTCTCTGAGGTCATTGCCGAGTCAAAGAAAAAAGAAACTATCAAAGAAAATCAAGGAACTGATGATACTATTTCTGACACAGACAGTGAAAATTTGTCCACAACTTCAGCAAGTTTGAGATTTAAGCCATGGATCGCAGATTTATTTTTACATAAACAATCATCTCAACGCGAAGAAGAAAGGTTGGAGAGATCTTATAATAGGCTTCAAATGTCCACAACTAGAGCTTTGCTAGAAAAGTTCTCGAGGCTCGACAGAGAAGCTGAAATCGAAATCTCATCCTATAAGACCGACTTGGAATTCAGTGGAAATGTAAGAGAAGCAGTAGCCTTATCTAGAAATGCTCCACCTGGCGCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCAAGATGGTTCAGTTATGCCGAGTTGGAGCTAGCCACTAGTGGATTTTCACCAGCCAATTTCTTGGCAGAAGGAGGATATGGATCTGTTCACCGAGGAGTTCTGCCAGATGGGCAAGTTGTAGCTGTCAAACAACATAAATTGGCTAGTTCTCAGGGTGATGTTGAATTCTGCTCAGAGGTAGAAGTCCTGAGTTGCGCACAGCATCGGAATGTCGTTATGTTGATTGGGTTCTGTATTGAGGATAAGAGAAGGCTGCTGGTTTATGAATACATATGTAATGGATCATTGGATACTCATTTATATGGGAGACAAAGGAAACCATTAGAATGGTCTGCAAGGCAGAAAATTGCTGTCGGAGCTGCTCGGGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGATGCATTATCCACCGCGACATGAGGCCTAACAACATTCTCATCACTCATGATTTTGAACCACTGGTAGTTGGCGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACTGGAGTGGAAACTAGAGTTATTGGAACGTTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGACAAATAACTGAAAAGGCTGATGTTTTTTCCTTTGGAGTGGTATTATTGGAGCTTGTGACAGGGCGTAAAGCTGTGGATATAAACCGGCCCAAGGGTCAGCAGTGTCTTACTGAGTGGGCACGACCACTGTTAGAAGAATGTGCCATTGAGGAACTGATTGATCCAAGGTTGGTAAGTCACTATTTAGAACATGAGGTGTCTTGCATGCTACATGCGGCATCAGTATGCATAAGGCGAGATCCTTGTTCTAGACCACGCATGTCACAGGTTCTGCGAATTCTAGAGGGCGACACAGTCATGGAAACGCCGCGTCATTACAGTGGTTCCCCTTCCCTGTGA 2079 0.4353 MSREQKKRGNHDKVSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQCSGRRLWGFPRFSGDCASAHRKSTSGASSENKNDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLEKQLKHEEKQCMEELQCNIVVMKHSQAKVLRLNLVGSQKKSIEETLPLPSEEHEMNGKQPKKKIGSLKSVKGTVVTPTSSPELETSFTATEVGTSSVSSSDPGTSPFFVSEVIAESKKKETIKENQGTDDTISDTDSENLSTTSASLRFKPWIADLFLHKQSSQREEERLERSYNRLQMSTTRALLEKFSRLDREAEIEISSYKTDLEFSGNVREAVALSRNAPPGAPPLCSICQHKAPVFGKPPRWFSYAELELATSGFSPANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQRKPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVFSFGVVLLELVTGRKAVDINRPKGQQCLTEWARPLLEECAIEELIDPRLVSHYLEHEVSCMLHAASVCIRRDPCSRPRMSQVLRILEGDTVMETPRHYSGSPSL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02721 692 Coils Coil 303 323 - -
Car01g02721 692 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Car01g02721 692 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 682 - -
Car01g02721 692 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Car01g02721 692 Pfam Protein kinase domain 409 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02721 692 SUPERFAMILY Protein kinase-like (PK-like) 387 677 IPR011009 -
Car01g02721 692 MobiDBLite consensus disorder prediction 262 282 - -
Car01g02721 692 CDD STKc_IRAK 409 676 - -
Car01g02721 692 Gene3D Transferase(Phosphotransferase) domain 1 479 687 - -
Car01g02721 692 ProSiteProfiles Protein kinase domain profile. 403 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02721 692 PANTHER OS01G0253100 PROTEIN 16 682 IPR045271 GO:0004714|GO:0006468
Car01g02721 692 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02721 Car-Chr1 52625207 52630060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02721 383 677 Trihelix Transcription Factor Family AT1G70460 53.821 5.36e-101 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Car01g02721 Pkinase 8.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02721 - - gmx:100789216 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02721 01 52625207 52630060 Car01g02721 01 52625207 52630060 ECH
Car01g02721 01 52625207 52630060 Car07g03120 07 58364801 58371715 PCT