Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02720 ATGAACACGGAAGAAGACCATTCTCCAAATCAAATCAAAAGACACAAATGCTCGGCTTGCTTTAAACAATACAAAAAGAAAGAGCATCTTATTGAGCACATGAAAACAACTTACCACTCTGTTCATCAGCCTAGATGTATGGTCTGTAAAAAGCACTGCAAATCTTTTGAATCTCTCAGAGAACATCTCACCGGACCTGTGGCTAGAGGAGTTTGTTCAGCGATTTTCTTTCAATGTGGTTGTCAACTATGTTTGACACTATCTGATAGTCCCGCTTCTCTCAATGACCATAGAGAAACATGTCGCCTATCTGCTCCTACTCCTCTAGGCACAAGCGAATTGCTCTATATAGACTCCCATAATGAAAACCACGCTGATTGCCGCCCTGGAGCAATTGCAATGGACTGTGAAATGGTGGGTGGCGGAAGTGATGGATCACTGGAACTTTGCGCTAGAGTATGCTTGATCGATGAAGATGAGAACTTAATCTTCCACACGTATGTACGACCTCAAATCCCTGTTACTAACTATAGGTATGATATAACTGGTCTCACAGAAGAGCATCTTCGAGATGGTATGCCACTTAAGGAAGTTCGTGAAAAGATATTGCAAATTTTATACAACGGAGAATCCATTGTAAAAGTTAGTTTGGATGGTGGAAAGGCCAGGCTACTTGTGGGTCATGACTTGGCACATGATTTAGATTGCTTGAGATACTGCAAAATACCGCCCATTGTTGAAGACAAACTTTGTCAGCCATTCGCTCAAATATCTTACCCGAACATATCTAGGTTATGA 798 0.4148 MNTEEDHSPNQIKRHKCSACFKQYKKKEHLIEHMKTTYHSVHQPRCMVCKKHCKSFESLREHLTGPVARGVCSAIFFQCGCQLCLTLSDSPASLNDHRETCRLSAPTPLGTSELLYIDSHNENHADCRPGAIAMDCEMVGGGSDGSLELCARVCLIDEDENLIFHTYVRPQIPVTNYRYDITGLTEEHLRDGMPLKEVREKILQILYNGESIVKVSLDGGKARLLVGHDLAHDLDCLRYCKIPPIVEDKLCQPFAQISYPNISRL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02720 265 SMART exoiiiendus 130 265 IPR013520 -
Car01g02720 265 Gene3D - 128 264 IPR036397 GO:0003676
Car01g02720 265 PANTHER EXONUCLEASE FAMILY PROTEIN 11 239 - -
Car01g02720 265 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Car01g02720 265 Gene3D Classic Zinc Finger 1 65 - -
Car01g02720 265 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Car01g02720 265 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 239 - -
Car01g02720 265 SUPERFAMILY Ribonuclease H-like 132 240 IPR012337 -
Car01g02720 265 Pfam Exonuclease 132 235 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02720 Car-Chr1 52618468 52621362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02720 1 253 C2H2 Transcription Factor Family AT3G27970 47.860 4.54e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02720 K18327 - gmx:100805841 390.193