Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02708 ATGGAATTGCAGCTTATTTTCCTTCTCATTAAGCTACATTTAGTTTTCAGTACTCCACTGCTTCATGAATATGCAGCCACCCATTTGCACCATTTGAGAATCAGAAGCCATTCAAGTTTTGCATTCTCACCATCAAATCCATCATCATCTAGAGCTTCTACAAACACTGCACTTCCACCTTCCAACAAGGCATTCCCCAAAGTTCCTACAAAGAGATGGACACATAGTCCTGTGGATTCTCCAATATCAAACCACAAGCATCACTATTCAAGAATTAAGTCCAGAAACCAAACTCCTGGACCAAACTACCCTATCCATCATCATACTCATACTCATCAAGGTCCTCCGCTCATCGAATCATCGCATTCGTCTTCTTCACCAATGATCAGCCAGGGTTTTCATGCACCTGCAACATCACCAGCAGCTCTACCAAACCACTTGAGAAGTATAAAAAGGTTATCAACTAACTACTTATCTAATAGTTCCTTCCTTTTCAATAATCTCATGTCAACAAAGTTAGGTGAAATATATATTGATCCTATCCTATTCCAAGATGTAGATTGCATGTTGACTTGCTCAGAGCCTTTGACATATACACCTCATGGATCGCCTTGTGGTTGTGTATGGCCACTTCAAGTTAAAATCTGCATAGGCCTTGCAGTATACAAGTTTTTTCCTTTGCAACAAGAAAAAACAACTGTTCTCATAAACTTGGTACCCCAAGAAGATAAGTTTGATGATACAGCAGCATTGTTAATATATCAGAAATTCTGGCATAAAGAGATTATCACTGACGCCTCACTCTTTGGTACCTATGAAGTAATTTTTGTTCACTATCCAGGCCTTCCACCATCTCCACCTTCAAGTGTTTCTGGTATAGATGTTGAACCATACATTGGTCCAGGCAACAACAATGGAACAATAGTCAAGCCTCTAGGAGTAGATGTTCCGAGTAAGCGAAAAGAAGGAAGTAGTAGAAGAATGGCTGCTACCATTGTGCTGTCATCTTTTGCTGCATTTGTTCTACTCATTGGAATTGTCTGGTTTTGTCTGTTGAAATGTAGTTTCTGTGCATTTGAACCTGAACAAATTCCAGATGTTGTATTTTCATTCTCTTCAAAGCGATCGGCCTCAGGCGCGGCTAGTTCATCGACTTATTGGAGCATGCCAGGTTCTAGATCAATGTCCTTCAGTTCAGGAACAATAACATATACAGGATCAGCTAAAATCTTTACCTTGAATGAAATAGAAAAGGCGACAAATAACTTCAATCCGTCACGAATACTAGGAGAAGGTGGCTTTGGTATTGTTTACAAAGGTAGCCTATATGATGGCAGGGATGTGGCAGTGAAGATTCTCAAAAGAGATGATCGTCAAAGTGGCCGCGAATTTATGGCAGAAGTTGAGACACTTAGCCGCTTGCACCATAGAAATTTGGTTAAACTGATAGGTATATGCATTGAGAAACAAACTCGCTGCCTAGTCTATGAGCTTGTTCCTAATGGCAGTGTAGAATGCCACTTACATGGTGTTGACAAGGAAACTGATCCACTTGATTTAGGGGCAAGGATGAAGATTGCACTTGGTGCAGCTAGGGGATTGGCTTATCTGCATGAAGATTCAAATCCATGTGTAATACATAGGGACTTTAAATCCAGCAACATCTTACTGGAACATGATTTTACACCAAAGGTTTCAGATTTTGGACTGGCTAGAACAACATTGGAAGAGGGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACCTAGCTCCTGAGTGTGCAATGACTGGCCACCTTCTTGTCAAAAGTGATGTTTACAGCTATGGAGTTGTACTCCTTGAGCTCTTAACTGGAAGAAAACCGGTGGATTTGTCACAACCACGAGGTAAAGAAAACCTTGTTGCTTGGATTCGTCCGCTTCTGACGAGTAAGGAGGGTTTGTTGAAGATCATAGACCCAGTTATTAAGCCCTACATTTCACTTGATACTGTGTTAAAAGTTGCAGCCATTGCATCAATGTGTGTGCAACCAGAAGCCACTCAACGTCCTTTCATGAGTGAAGTTGTTCAGGCCTTGAAGCTTGTATGCAGTGAGTCTGAGGAAACAAGTAATGTAAGAACAAGGAGTTTTCAAAACGATGATCACGTGACTGATGTAGAAGGGAAAATCTTAAGAGTTCCTAGTTATAGAGTGAACTTTTCAGTGTAA 2220 0.4077 MELQLIFLLIKLHLVFSTPLLHEYAATHLHHLRIRSHSSFAFSPSNPSSSRASTNTALPPSNKAFPKVPTKRWTHSPVDSPISNHKHHYSRIKSRNQTPGPNYPIHHHTHTHQGPPLIESSHSSSSPMISQGFHAPATSPAALPNHLRSIKRLSTNYLSNSSFLFNNLMSTKLGEIYIDPILFQDVDCMLTCSEPLTYTPHGSPCGCVWPLQVKICIGLAVYKFFPLQQEKTTVLINLVPQEDKFDDTAALLIYQKFWHKEIITDASLFGTYEVIFVHYPGLPPSPPSSVSGIDVEPYIGPGNNNGTIVKPLGVDVPSKRKEGSSRRMAATIVLSSFAAFVLLIGIVWFCLLKCSFCAFEPEQIPDVVFSFSSKRSASGAASSSTYWSMPGSRSMSFSSGTITYTGSAKIFTLNEIEKATNNFNPSRILGEGGFGIVYKGSLYDGRDVAVKILKRDDRQSGREFMAEVETLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVECHLHGVDKETDPLDLGARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTTLEEGNKHISTHVMGTFGYLAPECAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPRGKENLVAWIRPLLTSKEGLLKIIDPVIKPYISLDTVLKVAAIASMCVQPEATQRPFMSEVVQALKLVCSESEETSNVRTRSFQNDDHVTDVEGKILRVPSYRVNFSV 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02708 739 PANTHER OS01G0750732 PROTEIN 228 726 - -
Car01g02708 739 PANTHER OS01G0750732 PROTEIN 41 227 - -
Car01g02708 739 MobiDBLite consensus disorder prediction 40 131 - -
Car01g02708 739 Gene3D Phosphorylase Kinase; domain 1 396 498 - -
Car01g02708 739 Pfam Protein tyrosine and serine/threonine kinase 427 696 IPR001245 GO:0004672|GO:0006468
Car01g02708 739 MobiDBLite consensus disorder prediction 40 61 - -
Car01g02708 739 ProSitePatterns Protein kinases ATP-binding region signature. 429 451 IPR017441 GO:0005524
Car01g02708 739 PANTHER OS01G0750732 PROTEIN 228 726 - -
Car01g02708 739 PANTHER OS01G0750732 PROTEIN 41 227 - -
Car01g02708 739 CDD STKc_IRAK 429 697 - -
Car01g02708 739 MobiDBLite consensus disorder prediction 114 131 - -
Car01g02708 739 Gene3D Transferase(Phosphotransferase) domain 1 499 724 - -
Car01g02708 739 SUPERFAMILY Protein kinase-like (PK-like) 402 696 IPR011009 -
Car01g02708 739 ProSiteProfiles Protein kinase domain profile. 423 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02708 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02708 Car-Chr1 52551333 52556488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02708 86 726 Receptor kinase-like Gene Family AT5G56890 52.806 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Car01g02708 PK_Tyr_Ser-Thr 6.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02708 - - gmx:100775318 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02708 01 52551333 52556488 Car07g03105 07 58202965 58208766 PCT