Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02706 ATGGCAGCCAACATAGCAGAAAGGGTGCATTACCCATTAGACTCATCCTCATACAAAATCATCGATGAGATCGGCGCCGGAAACAGCGCCGTCGTCTACAAAGCACTCTGCATCCCCATAAACTCCACACCAGTCGCCATAAAATCCATAGACTTAGACCGATCACGCCCCGACCTCGACGATGTTCGACGTGAAGCAAAAACTTTATCACTTCTGTCTCACCCCAACATCCTCAAAGCTCACTGTTCCTTCACCGTCGGCCGCCGTCTTTGGGTGGTTATGCCGTTTATGGCCGGAGGTTCATTACAATCCATAATCACTCATTCTTTCCAAAACGGTTTAACTGAAGCATGCATAGCCATTGTTCTGAAAGACACTCTGAATGCTCTTTCTTATCTTCATGGTCAAGGTCACCTTCATAGAGATATCAAAGCTGGTAATATCCTTGTTGACTCAAATGGGTCAGTCAAACTTGCTGATTTTGGTGTCTCAGCTTCAATTTATGAGTCAAACAATAGTTCAGGAGGAGGATCAGTAGCATGttctgcttcatcttcatcttctaattctacttcttcttTTATGTTTACTGATTTTGCTGGAACACCTTATTGGATGGCTCCTGAGGTTATTCACTCTCACAATGGTTACAGTTTCAAAGCTGATATTTGGTCTTTTGGTATAACTGCTTTGGAGTTAGCACATGGAAGACCACCACTTTCTCATCTTCCTCCTTCTAAGTCAATGATGCTTAATATCACTAAGAGGTTTAGATTTTCTGATTTTGATAAATATAGTAAAGGTCATGGAGGTAGCAATAAATTCTCAAAGGCTTTTAAGGATATGGTTGCTTCTTGCTTGAATCAAGATCCTACTAAAAGACCTTCTTCTGAGAAGTTGCTTAAACACCCTTTCTTTAAAAACTGTAAAAGCTCGGATTTTTTGGTGAAGAATGTGTTGCTTGGATTGCCTAGTGTTGAGAAAAGGTATAATGAAAGCAAAGTTGTGGATCCAAATTCAAAGGGTAGtgatgatgatgatgaagatCCAGGGATGCAGGGAAATGTGAAACAGAGAAGAATTAGTGGTTGGAATTTCAATGAAGATGGGTTGAAACTTGAGCCGGTTTTCCCAAAGGATCACTGCAGAGATGATGTAGTGAAACAAGTTCGGTTTGAAGAAGAAAAAGTGATCAAAGAGCATGATGTTGTTGCATCAGGAACTGTGATGGAACCAAAACCGAATACTTCTTCTGATGTGGTTGATCATGATGAGTCTCTTGTGGTGGAAAAAGTAGGTAGTAATATTGGAGGAAGGGTTGTGAACAACCGTGAAGCTATGTTGGGAACTCTGAATGTGTTGAAAGGGAGCTTGGAACAAGAGTTGGGACAAGTCAAGTTTCTGATGAATCTAATTGGTGGAGAAGAGATTCATGTGGCTGATAGTGAGGAGCAAATGGTGCAGGAGATTTCTAAGTTGAGAACAGAATTAGAAGTTGAGAGGAAGAAGAACTTGCAGTTGGAGTTGCAGCTGGAGAATATCAAGCTTCACCTTTCTTCTGCTGTTAATAGTCCTAAAAGTTAA 1584 0.3977 MAANIAERVHYPLDSSSYKIIDEIGAGNSAVVYKALCIPINSTPVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVGRRLWVVMPFMAGGSLQSIITHSFQNGLTEACIAIVLKDTLNALSYLHGQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYESNNSSGGGSVACSASSSSSNSTSSFMFTDFAGTPYWMAPEVIHSHNGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLNITKRFRFSDFDKYSKGHGGSNKFSKAFKDMVASCLNQDPTKRPSSEKLLKHPFFKNCKSSDFLVKNVLLGLPSVEKRYNESKVVDPNSKGSDDDDEDPGMQGNVKQRRISGWNFNEDGLKLEPVFPKDHCRDDVVKQVRFEEEKVIKEHDVVASGTVMEPKPNTSSDVVDHDESLVVEKVGSNIGGRVVNNREAMLGTLNVLKGSLEQELGQVKFLMNLIGGEEIHVADSEEQMVQEISKLRTELEVERKKNLQLELQLENIKLHLSSAVNSPKS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02706 527 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Car01g02706 527 ProSiteProfiles Protein kinase domain profile. 18 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02706 527 SMART serkin_6 18 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02706 527 Coils Coil 480 510 - -
Car01g02706 527 SUPERFAMILY Protein kinase-like (PK-like) 15 312 IPR011009 -
Car01g02706 527 MobiDBLite consensus disorder prediction 332 360 - -
Car01g02706 527 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 523 - -
Car01g02706 527 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Car01g02706 527 Pfam Protein kinase domain 18 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02706 527 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 6 523 - -
Car01g02706 527 Gene3D Transferase(Phosphotransferase) domain 1 100 347 - -
Car01g02706 527 MobiDBLite consensus disorder prediction 332 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02706 Car-Chr1 52530384 52532194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02706 1 506 MAP Kinase Kinase Kinase Kinase AT4G14480 53.981 4.87e-178 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Car01g02706 Pkinase 4.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02706 K08835 - gmx:100820227 659.448