Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02690 ATGCCGCGGGGAAGGAGGATTAGGGCAAGGCTCCGCAGGAGCAATCTTTACACATTTGGTTGTCTTCGGCCAAATATGGCCGAGGAGGGGCCTCATCCACTTCAAGGTCCTGGATACTCAAGAACAGTGTATTGCAACCAGCCTCAACTCCATGAAAAGAGATTTCTATTTTACTGCAAGAATAATATATCAACGACCAAATACAATGCTATCATGTTTTTGCCTAAGGCACTGTTTGAACAATTTCGAAGGGTTGCCAACATATACTTCCTTTTGGCTGCTTGCCTTTCGTTATTTCCAATTTCTCCTTTCAGTCCACTAAGCATGATCGCTCCTTTGGCCTTTGTTGTGGGACTAAGTATGGCGAAGGAAGCATTGGAGGATTCGCGCAGGTTCCTGCAAGATGTCAAGGTTAATCGCCGGAAAGCTAGTCTCCATAAAGGCAATGGTGTTTTTGGTTTCAGGTCATGGCAGAAAATTACGGTTGGAGATGTGGTAAAAGTTGAAAAGGACCAATTTTTTCCAGCTGACTTGCTTCTCTTATCTTCAAGTTATGAGGATGGGATATGCTATGTAGAGACCATGAATTTGGATGGAGAGACCAACTTGAAGGTGAAAAGATCTTTGGAGGCTACCTTGTCTCTTGATAATGATGAAGCTTTTAAGGATTTCTCCGGAACAATACGTTGTGAAGACCCAAATCCCAATCTTTACACTTTTGTTGGGAACTTTGAGTATGAACATCAGGTTTATCCTCTTGATCCTGGTCATCTTCTCCTCCGAGATTCAAAGCTTAGAAACACTGATTATGTCTATGGGGTGGTCATTTTCACTGGTCACGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCGAAAAGAAGCACAATAGAGAAAACCATGGATTATATCATATACACTCTTTTCACTGTCCTTATATCGATATCCATAATTAGTTCAATAGGATTTGTTGCGAAAACTAAGTACCAGATCACAAAATGGTGGTATTTACAGCCCAACAATATTGAATATCAGTACGATCCCACAAAAATTGGTTTGGCTGGGATGAGCCATCTGATCACTGCACTTATTCTTTATGGATATTTAATACCCATCTCTCTTTATGTTTCAATTGAGGTTGTGAAGGTATTACAGGCCACCTTCATTAACCAAGACCTTCAAATGTATGATGAAGAAACTGGGACTCCAGCTGAAGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTTTCTGATAAAACCGGCACTTTAACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTACTGCCTATGGTGTACGTTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATCTCGAGGAGGATGATTTGAATATCTCTAATTTCCCCATGCAGAAGAAGGGTAAAGGGCTCTGGGAAAATGCTAGAAAGACTGACGAAATTGAACTCGAGGCTGTTATTACTTCTAAAGGTGATGAGGATCCAAGGCCTGCCATAAAAGGATTTGGTTTTGATGACAGCCGCCTCATGAATGGTAATTGGTCGAAAGATCCCAATGCTGATGTCATTTTGATGTTTTTCCGGATACTAGCAGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACCGACAGTTGTACATACGAAGCTGAATCACCTGATGAAGGGGCTTTTCTTGTAGCAGCTAGAGAATTTGGTTTTGAATTTAATAGAAGAACCCAATCAAGTGTTGTCGTACGTGAAAGTTTTTCTGTTCCAGGAAAAGTGGTTGAAAGAGAGTATAAAATTTTAAATCTGCTGGATTTTACTAGCAAAAGAAAGCGTATGTCAGTGATTGTGCGTGACGAGGATGGAAGCATTATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATCGATTATCTAAGAATGGAAAGAAGTATTTGGAGGTTACTTCTAGGCATTTGAATGAATATGGAGAAGCGGGTTTGAGAACCCTAGCCCTGGCTTACAGAAAGCTTGATGAGCAGGAGTACTCTGATTGGAATGATGAGTTTCAGAAAGCCAAGACAACTGTTGGGCCTAGCAGAGAGGCAATGCTTGAGAAGGTATCAGATAGTATGGAAAGAGAATTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAGCTGCAGAAAGGGGTGCCTCAATGCATTGATAAACTTGCTCAAGCTGGTCTAAAGATCTGGGTCTTGACAGGGGATAAGATGGAAACTGCAATCAACATCGGGTTTGCATGTAGTTTGCTTCGCCAAGGCATGAAGCAAATCTGTATCACTACTACGAATTCAGATTCAGTGATCAATGATGGGAAAGAGGTCATCAAAAGCAACATCTTGACTCAAATTACCAGTGCCTCACAATTGATGAAGCTGGAGAAGGATCCACATGCTGCGTTTGCATTAATTATTGACGGAAAAACCCTTACATATGCTTTAGAAGATGATATCAAACACCTATTTTTGGGATTAGCTGTTGATTGTGCATCTGTTATCTGCTGTCGTGTGTCTCCCAAACAAAAGGCCTTGGTAACAAGGTTAGTGAAAGAAGGAACTGGAAAGACCACTTTAGCAATAGGTGATGGGGCAAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTCATGGCTAGTGACTTTTCTATTGCTCAATTTCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAAAACATAGCATTTGGCCTCACTATATTCTATTTTGAGGCTTTTGCGGGCTTCTCTGGTCAATCGGTTTACGATGATTGGTACATGATATTGTTTAATGTTGTTCTCACATCATTGCCTGTCATTTCACTCGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTATATCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGAAAAGAATATTGGGATGGATGGGGAATGGTCTGTACTCATCCCTCGTCATCTTCTTCCTTGTCATCATCATCTTCTACGACCAAGCATTCCGTATGAATGGCCAGACTGCAGACATGGCTGCTGTTGGTACCACAATGTTCACTTGCATCATCTGGGCTGTCAACTGCCAGATTGCCTTGACAATGAGCCATTTTACATGGATTCAACACCTCTTTGTGTGGGGCAGCATAGCTACTTGGTACCTCTTTCTCATGTTATATGGCATGCTTTCTCCACAATATTCCAAGACTGCTTACCAAATATTGGTTGAAGTGCTTGCTCCTGCTCCTATTTATTGGACAGCAACCATTTTAGTAACAGTTACGTGCAATCTTCCTTATCTTGCCCACATATCCTTCCAAAGGTGTTTTAATCCCATGGATCATCACATCATCCAAGAAATCAAGTACTACAAGAAGGACATTGAAGATCAACACATGTGGAAGAGGGAGCGGTCCAAAGCAAGACAGGAAACAAAGATTGGATTCACAGCAAGAGTGGAAGCAAAGATCAGGCATCTGAAAGGGAAGCTGCATAAGAAGCAATCTTCGACAGGGTTTTTGTCCCCATCATGA 3675 0.4174 MPRGRRIRARLRRSNLYTFGCLRPNMAEEGPHPLQGPGYSRTVYCNQPQLHEKRFLFYCKNNISTTKYNAIMFLPKALFEQFRRVANIYFLLAACLSLFPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKASLHKGNGVFGFRSWQKITVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATLSLDNDEAFKDFSGTIRCEDPNPNLYTFVGNFEYEHQVYPLDPGHLLLRDSKLRNTDYVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKTMDYIIYTLFTVLISISIISSIGFVAKTKYQITKWWYLQPNNIEYQYDPTKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDLQMYDEETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLEEDDLNISNFPMQKKGKGLWENARKTDEIELEAVITSKGDEDPRPAIKGFGFDDSRLMNGNWSKDPNADVILMFFRILAVCHTAIPELNEETDSCTYEAESPDEGAFLVAAREFGFEFNRRTQSSVVVRESFSVPGKVVEREYKILNLLDFTSKRKRMSVIVRDEDGSIILFCKGADSIIFDRLSKNGKKYLEVTSRHLNEYGEAGLRTLALAYRKLDEQEYSDWNDEFQKAKTTVGPSREAMLEKVSDSMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTTNSDSVINDGKEVIKSNILTQITSASQLMKLEKDPHAAFALIIDGKTLTYALEDDIKHLFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWKRILGWMGNGLYSSLVIFFLVIIIFYDQAFRMNGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIATWYLFLMLYGMLSPQYSKTAYQILVEVLAPAPIYWTATILVTVTCNLPYLAHISFQRCFNPMDHHIIQEIKYYKKDIEDQHMWKRERSKARQETKIGFTARVEAKIRHLKGKLHKKQSSTGFLSPS 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02690 1224 Gene3D - 420 432 IPR023214 -
Car01g02690 1224 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 3 1218 - -
Car01g02690 1224 SUPERFAMILY HAD-like 418 936 IPR036412 -
Car01g02690 1224 SFLD p-type atpase 405 932 IPR044492 -
Car01g02690 1224 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1150 IPR023298 -
Car01g02690 1224 SUPERFAMILY Calcium ATPase, transduction domain A 149 287 IPR008250 -
Car01g02690 1224 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Car01g02690 1224 Gene3D - 114 289 - -
Car01g02690 1224 Pfam Cation transport ATPase (P-type) 546 651 - -
Car01g02690 1224 Gene3D - 433 456 IPR023299 GO:0000166
Car01g02690 1224 SFLD C1.7: P-type atpase like 405 932 - -
Car01g02690 1224 Coils Coil 449 469 - -
Car01g02690 1224 CDD P-type_ATPase_APLT_Dnf-like 61 1041 - -
Car01g02690 1224 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Car01g02690 1224 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 962 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car01g02690 1224 Gene3D - 725 921 IPR023214 -
Car01g02690 1224 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Car01g02690 1224 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Car01g02690 1224 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Car01g02690 1224 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Car01g02690 1224 Gene3D - 565 724 IPR023299 GO:0000166
Car01g02690 1224 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 1218 - -
Car01g02690 1224 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02690 Car-Chr1 52411846 52418618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02690 1 1217 Primary Pumps ATPases AT1G17500 75.390 0.0 1909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02690 K01530 - gmx:100778710 2165.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02690 01 52411846 52418618 Car07g03081 07 57952207 57958783 PCT