Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02683 ATGGATTCAAATGTTGAAGAAGGATCGACCGTGATCGCCATTGATACCGACCACAACAGCCGACGCGCCGTAAAATGGGCTGTGGATCACCTTTTAGAGAAAAACTCATCATGCATCCTTATTCACGTTAGAACCAAAACCTTCAATCCCAATGAATTTGATGTTGTCCCTAAACAAGGTCGTGCACCAACCGAAGAAGAATTGCACAATCTTTTTCTTCCTTTCAGAGGATTTTGTGCTCGAAAAGGGATTATAGCAAAGGAGTTGGTACTTCATGACATTGATGTTCCAAGTGCACTTACAGATTACATGATTGACAATTCTATCACCAACATTGTTCTTGGTGCTCCTCGCTGGAATAATGCTTTTATAAGGAAATTTAAAGATGTAGATGTTCCAACAAGCTTAATCAAGTCTCTGCCAGAATCATGCATGGTGCATATTATATCAAAAGGAAAAGTCCAAAATATTCAACCAACAGGTTGTTCCCAAAACATTACTATGACAATTTCTAGTCCCCAATCAAATTATTTGTCCAAAGATTTAAACAGAAAATCATTCAAACAAAGAATTTGGCGGCGATTAAGCAACGATGGGGGATCCTTTTGTCAAAACAACAATGCAAGACTAGTGCGATGTATGTCGCATAGAGAGACTTATCCATCAAGGATATCAATATCAGATGAAAACCAAAATGTTGTAGACAAGTCGCATATTTATGATAGGAGCAAATCTTCTAAAATGTTCCTAAATAGCATGGAGACAGAAAAAACCAGATTAAAACAAGAGAAGAAGAGAGTAACAAAGAAGTGTCGGTCAGCTTCGGTCGGTAGAGAAAGTGGTTCTGCAAAACAGATGGCAATGGAAGTTGAAAAGTGTAAGCAAGAAGAATGGAGCAGAGAAAAAGCTAGGCTTGTTGAACGGGCTGCATTGAATTTGGCAGAGGCAGAGAAGCAGAAAACTAGTGCAGAATTGAAGACTCAGAAGAGAAAACAAGAAGAAGTAAGTGGTGCGAATGAAGAAGCAGGAGGAGAAGAAAGAATGAGAACATTAAATGAAAGTGAAAAAAACAAACTTTTATTTAAGAGATACAATATTGAGGAAATTGAAGTTGCAATAAATTACTTTGATATTGATGGCAAAATTGGCGAGGGTGGATATGGACCTGTTTTCAAAGGTGTGCTTGATCAAGCTGCTGTTGCAGTTAAGGCCTTGAGACCTGACATAACCCAAGGAGAGAAGCAATTTCACCAAGAGGTCCTTGTTTTGAGTTCCATAAGACATCCAAACATTGTAATACTTTTAGGCGCTTGTCCGGAGTACGGATGCCTCGTGTATGAGTATCTAGAGAACGGAAGCTTAGAAGACCGCCTTTTTCAAAAAGACAACACGCTGCCAATTCCATGGAAAACTCGATTCAAAATAGCATCAGAGATTGCCACAGGCCTTCTTTACCTTCACAAAACAAAACCAGAACCGGTCGTGCACCGCGATCTCAAACCAGCAAACATTCTCTTAGATGGAAACTACGTAAGTAAGATCACCGATGTTGGTTTGGCAAGGCTTGTTCCTCCTTCTATTGCCAACAAAACAACTCAATATCACAAGACAACTGCGGCCGGAACATTTTGTTATATCGATCCGGAGTATCAACAAACAGGACTATTAGGCGTAAAATCGGACATATATTCATTAGGTGTGATGCTGCTACAGATCATTACTGGAAAACCACCTATTGGTGTGGCTCATTTGGTTGAAGAGGCCATTCAGAATGGTACTCTTGAAGAGGTTTTAGATCCAAATGTGACAGATTGGCCTGTTGAAGAGGCTTTATCATTTGCTAAATTGGCTTTGAATTGTTGTGAGATGAGAAAAAAGGATAGACCGGATCTTGCTACTGTCATATTGCCAGAGCTGAATAGACTCAGAGATTTAGAACTATAG 1944 0.3961 MDSNVEEGSTVIAIDTDHNSRRAVKWAVDHLLEKNSSCILIHVRTKTFNPNEFDVVPKQGRAPTEEELHNLFLPFRGFCARKGIIAKELVLHDIDVPSALTDYMIDNSITNIVLGAPRWNNAFIRKFKDVDVPTSLIKSLPESCMVHIISKGKVQNIQPTGCSQNITMTISSPQSNYLSKDLNRKSFKQRIWRRLSNDGGSFCQNNNARLVRCMSHRETYPSRISISDENQNVVDKSHIYDRSKSSKMFLNSMETEKTRLKQEKKRVTKKCRSASVGRESGSAKQMAMEVEKCKQEEWSREKARLVERAALNLAEAEKQKTSAELKTQKRKQEEVSGANEEAGGEERMRTLNESEKNKLLFKRYNIEEIEVAINYFDIDGKIGEGGYGPVFKGVLDQAAVAVKALRPDITQGEKQFHQEVLVLSSIRHPNIVILLGACPEYGCLVYEYLENGSLEDRLFQKDNTLPIPWKTRFKIASEIATGLLYLHKTKPEPVVHRDLKPANILLDGNYVSKITDVGLARLVPPSIANKTTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPIGVAHLVEEAIQNGTLEEVLDPNVTDWPVEEALSFAKLALNCCEMRKKDRPDLATVILPELNRLRDLEL 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02683 647 Gene3D Phosphorylase Kinase; domain 1 347 448 - -
Car01g02683 647 Pfam Universal stress protein family 11 121 IPR006016 -
Car01g02683 647 CDD STK_N 9 152 - -
Car01g02683 647 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 119 - -
Car01g02683 647 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 646 - -
Car01g02683 647 Coils Coil 299 333 - -
Car01g02683 647 MobiDBLite consensus disorder prediction 316 349 - -
Car01g02683 647 ProSiteProfiles Protein kinase domain profile. 376 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02683 647 SMART serkin_6 376 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02683 647 Coils Coil 250 270 - -
Car01g02683 647 Pfam Protein kinase domain 378 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02683 647 Gene3D HUPs 9 139 IPR014729 -
Car01g02683 647 PANTHER OS02G0152300 PROTEIN 9 646 - -
Car01g02683 647 SUPERFAMILY Protein kinase-like (PK-like) 358 635 IPR011009 -
Car01g02683 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Car01g02683 647 Gene3D Transferase(Phosphotransferase) domain 1 449 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02683 Car-Chr1 52351936 52354684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02683 88 645 Receptor kinase-like Gene Family AT5G12000 47.735 7.72e-172 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car01g02683 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02683 - - gmx:100814365 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03070 07 57774096 57779258 Car01g02683 01 52351936 52354684 PCT