Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02674 ATGGGGAGACTTGTGTTTGTGGTTTTCCCACTAATAGTAGCTTTTGCAATGTTGAGCCTGTGTCATGGGATGGCAGCAGCAGCAGCACCTCCAAAACCAAAGTTGCAATGGCATTACTATCAGGTTCACAATACATGCCGCGACGCAGAGCAGTATGTCCGACACGAAGTGAAGATGTTTTGGAAAAGTGACAAAAGCATTACAGCTAAATTACTACGCTTGATTTCCTCTGACTGTTTTGTCACCggctgtgatgcatcaatactgcttgatgaaggaccgaaaccagaaaaaactgcactgcagaaccgggggcttggaggatttgtaataattgacaagatcaaaactgttctagaatcacgatgccctggaattgtctcctgctctgatatactccatctcgccaccagggatgctgctAAAATGGCAggtgcaccaggttatccagttttcacaggaagaaaggatggcATGAAATCAGATGCTGCGTTAGTAGACCTGCCATCACCATCCATCTCATGGCAGAAAGCTCTAGAATATTTTGAATCGAGGGGATTGGACGTACTAGATATGGCAACACTCTTAGGAGCACACACAATGGGCCGAACACATTGTAGCCACATTGTTGATAGGCTGTATAATTACAGTGGTACTGGAAATCCAGACCCAAGCATGGACGCTACTTTTCGAGACACAATGAGAGGACTTTGTCCCCCCAAAACAAAGAAAGGACAACATGACCCACTGGTATTCCTTAACCCAAATTCTGGATCAAATTACACCTTCAGAGAATCATACTACAAAAGGATCCTACACCGTGAAGCTGTCCTGGGAGTCGATCAACAATTACTATTTGGCGATGCCACCAAAGAGATCACCGATGAATTTGCTGATGCTGCTGGATTAGAAGATTTTAGGAGATCTTTTGCTCAATCAATGTTCAAAATGGGAAATATCAAAATTTTAACAGGAAATCAAGGAGAGATACGCCGGAATTGTCGATTCACAAATAAGTGA 1020 0.3353 MGRLVFVVFPLIVAFAMLSLCHGMAAAAAPPKPKLQWHYYQVHNTCRDAEQYVRHEVKMFWKSDKSITAKLLRLISSDCFVTGCDASILLDEGPKPEKTALQNRGLGGFVIIDKIKTVLESRCPGIVSCSDILHLATRDAAKMAGAPGYPVFTGRKDGMKSDAALVDLPSPSISWQKALEYFESRGLDVLDMATLLGAHTMGRTHCSHIVDRLYNYSGTGNPDPSMDATFRDTMRGLCPPKTKKGQHDPLVFLNPNSGSNYTFRESYYKRILHREAVLGVDQQLLFGDATKEITDEFADAAGLEDFRRSFAQSMFKMGNIKILTGNQGEIRRNCRFTNK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02674 339 SUPERFAMILY Heme-dependent peroxidases 37 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PANTHER PEROXIDASE 25-RELATED 17 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 Pfam Peroxidase 53 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 CDD secretory_peroxidase 35 337 IPR033905 GO:0004601|GO:0042744
Car01g02674 339 Gene3D - 39 338 - -
Car01g02674 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Car01g02674 339 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 Gene3D Peroxidase, domain 2 169 317 - -
Car01g02674 339 PANTHER PEROXIDASE 61-RELATED 17 336 - -
Car01g02674 339 ProSiteProfiles Plant heme peroxidase family profile. 34 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car01g02674 339 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02674 Car-Chr1 52244580 52246152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02674 25 338 Peroxidase AT2G43480 64.968 2.29e-158 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02674 K00430 - gmx:100797875 501.901