Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02671 ATGGAGATAAGTCCTTATAACACTTCAAAGAAAACAACAAAGTTGAAGTTGAAGAAGCATCAAAGCAATAATCATATTGTTCATCATCATGAAGCATCCATAGACATGCATAGATCATCAACATCTTCAGATTCTAATAGTGAAAcatgtcatgatcatgatcatgatcatgatcaAGATGGTAATATTAAATGGTCCTCCAAACTTCTCAAAGATTGTGCAAAAGCTATATCCGATAGAGATTCGTTGAAAATTCACCATCTTCTTTGGATGTTAAACGAGTTAGCTTCTCCTTATGGAGATTCCGACCAAAAACTAGCTTCATATTTTTTACAAGCTCTATTTTGCAAGGCAACACAATCAGGTGAAAAGTGTTACAAGACTCTATCCTCAATAGCTCAAAAGAATCACTCTTTTGATTCAGCTAGAAAATTAATACTCAAGTTTCAAGAGGTAAGTCCTTGGACAACTTTTGGACATGTGGCTTCAAATGGTGCAATTTTGGAAGCTTTAGAAGGTGAAACTAAACTTCACATAATTGATATTAGCACCACCCTTTGTACTCAATGGCCTACTCTTTTAGAAGCTTTAGCTACAAGAAATGATGAAACTCCTCACCTTAAGCTCACACTTGTGGTAATGAATTCTAGCAATAATGTTGTTATGAAGGAAATTGGTCAAAGAATGGAGAAATTTGCTAGGTTAATGGGAGTACCTTTTGAATTGAATGTTATTAGTGGTTTGAATCATCTAAGAGAATTAACAAAAGAGAGACTTGGAGTTCAAGAGGGTGAAGCAATAGCATTGAATTGTGTTGGAGCAATGAGAAGAGTTGAATTAGAAGAAAGAGGGGGTGTGATTAGCATGTTTAAATCACTTTGTCCAAAAGTTGTAACATTTGTTGAGGAAGAAGGTGATTTTTGTAGCTCAAAGGATGATTTTGTGAAATGTTTTGAAGAGTGTCTTAGGTTTTACACACTTTACTTTGAGATGTTGGAGGAGAGTTTTCCACCAACAAGTAATGAAAGGTTGATGTTGGAAAGAGAGTGTTCAAGAAGCATAGTTAGGGTTTTGGCTTGTAGTAATGAATTTGATCATGAAAATAATATTGGTGATAATTGTGAGAGAAGGGAGAGAGGAAAACAATGGTGTAAAAAGCTTAGCAATGAATTTTCACCATATGGATTTAGTGATGATGTTGTTGATGATGTAAAAGCATTGCTAAAAAGGTACCAAAGTGGTTGGTCACTTGTTGTTCCTCAAGGAGATGATAATCaaacaggaatttatctcacatggaaggaggagccagttgtttgggcatcatcatggaAACCCTAG 1341 0.3274 MEISPYNTSKKTTKLKLKKHQSNNHIVHHHEASIDMHRSSTSSDSNSETCHDHDHDHDQDGNIKWSSKLLKDCAKAISDRDSLKIHHLLWMLNELASPYGDSDQKLASYFLQALFCKATQSGEKCYKTLSSIAQKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISTTLCTQWPTLLEALATRNDETPHLKLTLVVMNSSNNVVMKEIGQRMEKFARLMGVPFELNVISGLNHLRELTKERLGVQEGEAIALNCVGAMRRVELEERGGVISMFKSLCPKVVTFVEEEGDFCSSKDDFVKCFEECLRFYTLYFEMLEESFPPTSNERLMLERECSRSIVRVLACSNEFDHENNIGDNCERRERGKQWCKKLSNEFSPYGFSDDVVDDVKALLKRYQSGWSLVVPQGDDNQTGIYLTWKEEPVVWASSWKP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02671 446 MobiDBLite consensus disorder prediction 1 59 - -
Car01g02671 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 445 IPR005202 -
Car01g02671 446 ProSiteProfiles GRAS family profile. 57 445 IPR005202 -
Car01g02671 446 PANTHER PROTEIN SHORT-ROOT-LIKE 38 445 - -
Car01g02671 446 Pfam GRAS domain family 68 445 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02671 Car-Chr1 52210807 52212469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02671 58 446 GRAS Transcription Factor Family AT4G37650 52.580 1.77e-146 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car01g02671 GRAS 6.3e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02671 - - gmx:100818806 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02671 01 52210807 52212469 Car01g02671 01 52210807 52212469 ECH
Car07g03025 07 57089973 57092067 Car01g02671 01 52210807 52212469 PCT