Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02667 ATGGATAAGGACAAATCTTTGGGTCTTGGTAGTGGTTTTCCACCTCCATCTGGTCGTTATTCGGGTTACTCACCCACTGGAAGTGCTTTCAATGTGAAATCTGAACCCTCATCGTCAAATTATCCTCCACTTATACCGGGAACTAGCTCAGATTCTAGTGGCTTTAGTCATGATATTAGCAGAATGTCTGATAATCCCCCGAGAAATAGAGGTCATAGGCGTGCTCATTCGGAGATTCTCACCTTGCCCGATGATATTAGCTTTGATAGTGACCTTGGTGTAGTTGGTGGTGCTGATGGACCCTCATTCTCTGATGATACTGAGGAGGACTTGCTATCCATGTACCTTGATATGGATAAATTTAATTCTTCGTCTGCAACGTCCTCATTTCAAATGGGTGAGTCGTCTAATGCTGCTGGAGCATCAGCTTTGGGACCAACGTCGGTGGGGCAGGCATCAGGAGGGGAAAATATTGGTGGTGGCACTACTAATGAAAGGCCCAGAGTTAGACACCAGCACAGCCAATCCATGGATGGGTCGACAACCATCAAACCTGAGATGTTAGTCTCGGGTTCAGATGATATGTCTGCAGCTGATTCCAAAAAAGCAATGTCAGCAGCCAAGCTTGCAGAGCTTGCCTTGATTGACCCCAAGCGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCAGCGAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAAAGGAAAGTGCAGACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACGAACGGACTGAATTCTGAGAACAGTGAGCTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAGGATGCTTTAAATGATGCGTTAAAAGAGGAAATTCAGCATTTGAAAGTACTGACTGGGCAAGCTATTCCACCAAATGGAGGACCTATGATGAACTTTGCTTCTTTTGGAGGGGGGCAGCAGTTCTATCCCAATAATAATCATGCCATGCACACTCTTTTagctgcacaacagtttcaacagctccaaattcatcctcagaagcagcagcagcatcagcagcagcagcagcatcagcatcagtttcagcaacaaatgcagcaacaacagcatcaacagcaacaaatgcagcagcagcaggagcaacagcaacaacagcaacaatcaggtgatttgaaaatgagagcagccacaCCTCCATGTTCCAAAGACAATCCTTCATCAGATGTAAATCCTTCTGTAGCCAAGGATTGTTGA 1293 0.3867 MDKDKSLGLGSGFPPPSGRYSGYSPTGSAFNVKSEPSSSNYPPLIPGTSSDSSGFSHDISRMSDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSSFQMGESSNAAGASALGPTSVGQASGGENIGGGTTNERPRVRHQHSQSMDGSTTIKPEMLVSGSDDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAIPPNGGPMMNFASFGGGQQFYPNNNHAMHTLLAAQQFQQLQIHPQKQQQHQQQQQHQHQFQQQMQQQQHQQQQMQQQQEQQQQQQQSGDLKMRAATPPCSKDNPSSDVNPSVAKDC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02667 430 MobiDBLite consensus disorder prediction 124 184 - -
Car01g02667 430 Coils Coil 371 401 - -
Car01g02667 430 MobiDBLite consensus disorder prediction 21 62 - -
Car01g02667 430 MobiDBLite consensus disorder prediction 124 160 - -
Car01g02667 430 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Car01g02667 430 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 376 - -
Car01g02667 430 MobiDBLite consensus disorder prediction 1 82 - -
Car01g02667 430 Coils Coil 234 303 - -
Car01g02667 430 Pfam bZIP transcription factor 218 276 IPR004827 GO:0003700|GO:0006355
Car01g02667 430 MobiDBLite consensus disorder prediction 355 430 - -
Car01g02667 430 CDD bZIP_plant_RF2 219 268 IPR044759 GO:0003700|GO:0006355
Car01g02667 430 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 376 - -
Car01g02667 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 279 IPR004827 GO:0003700|GO:0006355
Car01g02667 430 MobiDBLite consensus disorder prediction 63 80 - -
Car01g02667 430 MobiDBLite consensus disorder prediction 355 405 - -
Car01g02667 430 Gene3D - 217 289 - -
Car01g02667 430 SUPERFAMILY Leucine zipper domain 218 269 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02667 Car-Chr1 52181323 52185460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02667 19 348 bZIP Transcription Factor Family AT1G06070 74.699 5.67e-172 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car01g02667 bZIP_1 4.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02667 - - gmx:100786738 575.089