Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02659 ATGGAATTTGGGATTGATGACTCTAGTAATGGTGAGGCAGTAGGAAATGCTATTATGGGAGAGGTTAGTAGTAGTATAGCTGACAAAGAAAAAATGGACTGCAGTTCTTTTGAGCCAACGGATGAACAAGATCAAGATGATAATATGACTCAAGATTCCTCTGGAGTGGACCAAATTCCTTCAGCAATTCCTGCAGCACCGCTTGTGAGATCAGTTGAtgaaccctttataggtcaggagtttgtatcggaagccgaagcgcatgcattttataatgcatatgctacacgtgttggattcatcatacgtgtaagtaagctctcaaggtcaaggcgtgatggatctgttattgggcgagctcttgtttgcaacaaagaaggtttcagaatgcctgacaagcgtgaaaagattgtaaggcaaagagcagaaacaagggttggttgcagggcaatgattatggtgaggaaattaaattctggcttatggtctataaccaagtttgtaaaggagcacaCGCATCCTCTGACTCCTGGAAGAGGTAGAAGAGACTTCGTTTATGAACAATATCCGAGTGGACATGACAGAGTTCGAGAACTATCTCAGCAGTTGGCTATAGAGAAAAAGCGATCTGCGACATATAAAACGAACCTTGAATTGTTATATGAGTACATTGAGGAGCATAATGAAACCGTTTCAAAGAAGATACAGCACATAGTGGAGAGTGTGAAGGAGATGGAAGCCAAAGAACAAGAAGAGAAACCTAGATAG 768 0.2539 MEFGIDDSSNGEAVGNAIMGEVSSSIADKEKMDCSSFEPTDEQDQDDNMTQDSSGVDQIPSAIPAAPLVRSVDEPFIGQEFVSEAEAHAFYNAYATRVGFIIRVSKLSRSRRDGSVIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKLNSGLWSITKFVKEHTHPLTPGRGRRDFVYEQYPSGHDRVRELSQQLAIEKKRSATYKTNLELLYEYIEEHNETVSKKIQHIVESVKEMEAKEQEEKPR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02659 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 251 - -
Car01g02659 255 MobiDBLite consensus disorder prediction 1 59 - -
Car01g02659 255 Pfam FAR1 DNA-binding domain 90 176 IPR004330 -
Car01g02659 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02659 Car-Chr1 52148316 52152033 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car01g02659 FAR1 3.9e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02659 - - gmx:100806900 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02659 01 52148316 52152033 Car06g03691 06 68676624 68680932 PCT