Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02658 ATGTTATTTTGTTCACAAGTTTCGAGTCTTGGTTCCATGTCATCAATTGCTGTCTCATATGGAGAGAAAGGTTCTGCTTTCTGTGGTTTGAAATCAGATGGATCTCACACTGTGACATGTTATGGATTGAACTCAGCCATAATTTATGGGACACCAGCTCATTTTCCATTCATTGGTTTAACTGCTGGTGATGGATTTGTTTGTGGTCTTCTAATGAGTTCAAATCAACCTTATTGTTGGGGTAGTAGTAGCTATATTGAAATGGGTGTGCCACAACCTATGGTTAAGGAAGCACAGTACTTAGAAATCAGTGCTGGTGATTATCATGTTTGTGGTTTGAGAAAACCTTTGACAGGAAGATATAGAAACAGTTCTTTTGTTGATTGTTGGGGTTACAACATGACAAAGAATTTTGTGTTTGATGGACAGATTCAATCTATTTCAGCAGGTTCTGAGTTCAATTGTGGTCTTTTTTCGCAGAATAGGACCGTCTTTTGTTGGGGTGATGATGAAGCTAGTAGTCAAGTTATTAGTTTGATTCCACAAGGGACGAGGTTTCAGAAAATCTCTTGTGGAGGGTATCATGTTTGTGGAATCATGGAAGGTGTGAATTCTAGAAGTGTTTGTTGGGGGAGGAGTTTGGAAATAGAGGAAGAGATTTCATTGATAGGTTCAAGAAAAGGACAACAAGGGAATGTTGAGTTGGCTCCAAAGGATGCTATGCTTTCTGTTGTTGGAGGAAAGTTTCATGCTTGTGGTATTAAAAGCTATGATCATGGTGTGATTTGTTGGGGGTTAACTTTGAAAACAAGCACACAAGTTCCTAAAGGGATTAAAGTGTTTGAAATTGCAGCTGGTAATTATTTTACATGTGGAATACTTGCTTCAAAATCTCTTGAACCTATTTGTTGGGGTGTTGGATTTCCAATTTCACTTCCTTTGGCTGTTTCACCAAGAAAGTGTTGGTTTACACCTTGTCCTCCTGGTTACTATGAAATTGATGAACAAAAGGGTAATAGTGTTTGCAAGTTTCCAAATTCTCATCTTTGCATTCCATGTAGTAGTGTTTGTCCATCTGAAATGTATCAGAAAAGTGTATGCAATTTGAAATCTGATATATTGTGTGAATATAATTGTTCTGTTTGTTCTTCACCTGAGTGCTTCTCCAATTGTTCAACCTCTTCTTCTTCTTATTCCAATGATGTTAGGAAGAAAAATGAAAGGTTTTGGTCTATGCAGTTACCAGTTGTTTTTGCTGAGATAGCATTTGCTGTTTTCTTAATCAGTGTTGTGTCTATAACCGCGGTTATGTACGTTCGTCACAAGCTGAGAGGTTGTGAGTGTTCAAACTCGAAGACGAAGAAGATTAATGTTAGTTCTTCGGCTCAAAAGGAGAACGGAAAGATTCGGCCGGACATGGAGGAGTTCAAATTAAGGAGGGCTCAGATGTTCACCTACGAGGAACTCGAAAGAGCGACCGATGGATTCAAAGATGAATCAATTGTAGGNNNNNNNNNNNNNNNNNAGGGAAAGGAAGCTTTTCATGTGTTTTCAAAGAAAAATTCAAAAGAGTTTCACACAGAACTTGACTTGCTTTCTAGGTTGAACCATGCTCATTTGCTCAACCTATTAGGCTATTGTGAAGAAGGTGGGGAAAGACTTCTTGTTTATGAGTACATGGCTCATGGATCATTGCACCAACACCTCCATGGCAAAAACAAAGAGTTGAAGGAGCAGTTGGATTGGATTCGAAGGGTAACAATTGCAGTCCAAGCGGCTCGAGGGATCGAATACTTGCACGGCTATGCTTGTCCGCCTGTGATTCATAGAGACATCAAATCTTCAAACATACTCATTGATGAAGAACACAATGCTAGAGTTTCCGATTTCGGTTTATCTCTACTAGGTCCTGCAGATAGTAGTTCTCCACTAGCCGAGTTACCAGCCGGAACACTAGGTTATCTTGACCCTGAATACTATAGACTTCACTACCTCACGACAAAATCAGATGTTTACAGTTTTGGCGTTCTACTATTAGAAATTCTAAGCGGTAGAAAAGCTATTGACATGCAATTCGAAGAAGGTAACATTGTTCAATGGGCGGTTCCATTAATAAAATCGGGCGATATAGCCGCTATTTTAGACCCTTGTTTGAAACCACCTTCTGATATTGAAGCATTGAAAAGGATAGCTAATGTTGCTTGTAAAAGTGTGAGAATGAGAGGGAAAGATAGGCCTTCAATGGACATAGTAACAACAGGTTTGGAAAGAGCTTTAGCAATGTTAATGGGAAGTCCTTGTATTGAACAACCAATTTTACCAACTGAAGTTGTTTTAGGAAGTAATAGAATGCATAAGAAATCATCTCAAAGGTCTTCAAATAGGTCGGTTTCGGAAACCGATGTGGCCGGCGCAGAAGGCGGTGAAGATCAACAAAGGTTTGAGTTTAGAGCACCTTCTTGGATTACTTTTCCAAGTGTTACTTCTTCTCAAAGAAGAAAATCATCTGGGTCAGAAGGTGAAGTTGATGTGAAAATTGTTGAAGGAAGAAACTTTGGAAATGTTGGAAATGGTGATGTTTTGAGAAGTCTTGAAGAAGAGATTGGTCCTGCTTCTCCTCAAGAGAGACTCTTCTTACAACATAACTTTTAA 2652 0.3888 MLFCSQVSSLGSMSSIAVSYGEKGSAFCGLKSDGSHTVTCYGLNSAIIYGTPAHFPFIGLTAGDGFVCGLLMSSNQPYCWGSSSYIEMGVPQPMVKEAQYLEISAGDYHVCGLRKPLTGRYRNSSFVDCWGYNMTKNFVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDDEASSQVISLIPQGTRFQKISCGGYHVCGIMEGVNSRSVCWGRSLEIEEEISLIGSRKGQQGNVELAPKDAMLSVVGGKFHACGIKSYDHGVICWGLTLKTSTQVPKGIKVFEIAAGNYFTCGILASKSLEPICWGVGFPISLPLAVSPRKCWFTPCPPGYYEIDEQKGNSVCKFPNSHLCIPCSSVCPSEMYQKSVCNLKSDILCEYNCSVCSSPECFSNCSTSSSSYSNDVRKKNERFWSMQLPVVFAEIAFAVFLISVVSITAVMYVRHKLRGCECSNSKTKKINVSSSAQKENGKIRPDMEEFKLRRAQMFTYEELERATDGFKDESIVXXXXXXXGKEAFHVFSKKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGKNKELKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQFEEGNIVQWAVPLIKSGDIAAILDPCLKPPSDIEALKRIANVACKSVRMRGKDRPSMDIVTTGLERALAMLMGSPCIEQPILPTEVVLGSNRMHKKSSQRSSNRSVSETDVAGAEGGEDQQRFEFRAPSWITFPSVTSSQRRKSSGSEGEVDVKIVEGRNFGNVGNGDVLRSLEEEIGPASPQERLFLQHNF 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02658 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Car01g02658 883 Pfam Protein tyrosine and serine/threonine kinase 518 702 IPR001245 GO:0004672|GO:0006468
Car01g02658 883 Gene3D Transferase(Phosphotransferase) domain 1 561 763 - -
Car01g02658 883 Gene3D Phosphorylase Kinase; domain 1 511 560 - -
Car01g02658 883 ProSiteProfiles Protein kinase domain profile. 486 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02658 883 PANTHER RECEPTOR-LIKE KINASE 4 883 - -
Car01g02658 883 Gene3D - 56 320 IPR009091 -
Car01g02658 883 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 4 883 - -
Car01g02658 883 SUPERFAMILY RCC1/BLIP-II 9 265 IPR009091 -
Car01g02658 883 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 325 375 IPR001368 GO:0005515
Car01g02658 883 MobiDBLite consensus disorder prediction 783 800 - -
Car01g02658 883 MobiDBLite consensus disorder prediction 783 810 - -
Car01g02658 883 SMART serkin_6 412 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02658 883 SUPERFAMILY Protein kinase-like (PK-like) 483 751 IPR011009 -
Car01g02658 883 SUPERFAMILY RCC1/BLIP-II 242 307 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02658 Car-Chr1 52144176 52146889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02658 7 883 Receptor kinase-like Gene Family AT3G59420 66.482 0.0 1189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Car01g02658 PK_Tyr_Ser-Thr 1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02658 - - gmx:100807392 1368.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03688 06 68659158 68665542 Car01g02658 01 52144176 52146889 PCT