Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02656 ATGGATCACCAATCTGGTCAGGGATTTGACTCAGATGGTAGTGACCTTGATGTGCTTGCAGAAATCAATGACAAACATGAGAAAATAGAAGATGAATTTTCAAACAATTTTGAATCATGTACAGGTGAAGATGAAAAGTTTGTTGAACAACCTGTAGAAGATTCAGACACATTAGAGCCATTCATTGGCATGCAGTTCAACTCAAGGGaggaagccagagaattctaccatgcctatggtaggcggataggatttacagtacgaatacaccataaccgccgttcgcgagtaaataaccaggttattggccaagcttttgtctgctcaaaagaaggctttcgtgcaaagaagtatgtgcacagaaaagatagagtgctccctcctccgccagccacccgagaaggatgtcaggccatgataaggctggctttacgggatggagggaagtgggttgtcaccaaatttgtgaaggggcatacgcataaactgatgagtcctagtgaagttccatggcgaggatcTGGGAAGCACTTGGTTAGTGAGGATGAGAAAGATAGGAGAATCCGTGAGCTATCGCTTGAGTTGTACAATGAAAGGCAAAAATGCAAACGACGGTGTGCAGCATATGAAGAACAGTTAAATATGATTCTGAACGATTTGGAAAAGCACACAGAACACATCTCTAAAAAAGTTGCTGATGTAGTCAGAAGCATAAGAGAGATCGAGGAAGAAAAATCAGATTCAGATGGCAGGTAA 756 0.2288 MDHQSGQGFDSDGSDLDVLAEINDKHEKIEDEFSNNFESCTGEDEKFVEQPVEDSDTLEPFIGMQFNSREEAREFYHAYGRRIGFTVRIHHNRRSRVNNQVIGQAFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKGHTHKLMSPSEVPWRGSGKHLVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISKKVADVVRSIREIEEEKSDSDGR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02656 251 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Car01g02656 251 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 250 - -
Car01g02656 251 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 250 - -
Car01g02656 251 Coils Coil 199 226 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car01g02656 FAR1 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02656 - - gmx:100810283 446.432