Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02640 ATGGATCCTGAAAGATCAATTGAGGAACAATTGTCCAAGCTACATCCTTCCTTGCCACTAAATACAAGAATTGGAATAGTTGGTGCTGGTCCAAGTGGAATATCAGCTGCTTATGCATTGGCAAGGCTTGGTTATAATAATATCACTGTCTTGGAGAAACACCATGCAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTGGGTGGACAAGTTCTGGCTGCAAGCAGTGCTCCTGTCATCTTTCATTTGGCAAAAGAGACAGGGTCAGCACTAGAAGAATTGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTCAGGAAAATACCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTAACATTGAAAATCCAAGAAAAGGTGAAGAATTCTGGTCGATTTGGGGTCCTTGCTGTCAGCGAAATTGCTGCAGACTTAACTCCGGAATATCTTGAGCATCATGGACTCAAATCAGTTCCTAAATCTGTTGCTTATGGTTACACTGCTTCAGGATATGGATTCATGCAAGACATGCCTTATGCCTATGTTCATGAATTTACCAGAACGTCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGTCTTTGGCAGAAGATTGCTGAATCACTTCCTATAAAACTCCACTGTAACACCGAAGTCTTGGCAATAAGGCGGAATTCTGAGATTGTCGCTGTTAACGTCAAGAGCTCAAATGAAATTGAAACTATGGAATTTGATAAGATCATAGTCTCTGGTAACTTTCCATTAAAATATGGAAGAACTTATAGATTATCTCCTTCAACTTGCATAGATTGTGAAGCAGAAGTGATGGATTCTAGTGATATTGAAAAGGAGTTATTCAGCAAAGTAGAAGTAAATGACTACTACACCACTGTTTTCAAGATCAAAGGGCTGGATCATATGCCAGTTGGATTTTATTATTTTAATGAATATATGGAAGATCCAAGTACAATTGGAAATCCGGTTGCCATGCAGAAGTTTTATGCTGACACCGATATATTCTTGCTCTGGTCTTATGGCAACTCCTTTGATATTAAGGGACCAACTATCACTGAGCTTGCAATCAAGAATATTGAATCCATGGGGGGAGAAGTTGAGAGCTTTATTCTTCAGCGTCGCTTTAAGTATTTTCCTCATGTTAGCAGCCAAGATATGAAAAACGGTTTCTATGAAAAGTTGGAATCAGAACTCCAAGGTTCAAGGAATACTTATTATGTCGGTGGACTTATGGCATTTGAGCTCACAGAGAGAAATTCATCTTATGCCATGGCTCTTATGTGCAAGAACTTTGCAAAGAGCAGTGATCTGCCGGTGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAACTGAGTTTCAGAGAAAGGAACCTAAAGAACTAGCTGAATTGCCCGGTGTGCAATTTCCCGATTTGCCAACTTTGAATAGCTATTTAAAGCACTGGGGAACTCATCCAGTCACTCAAGACAGAACCCTTTATAGTTGGATAAATGAAGAAGGGAAAGTGATAGTTAAGAGGACATATAGAGAGCAACATTTAAATGCTTCTTGCATTGCAAGTAAACTCTTAAAAAGCCACAAGCCAGTTATCAAGCCTGGTGACAAGGTTCTTCTAGTCTATCTTCCCGGTCTAGATTTCGTCGATGCTTTCTTTGGATGTCTGAGAGCTAAAGTTATACCTGTCCCAGTTCTTCCTCCGGATCCCATGCAAAGTGGTGGGCAAGCACTTTTGAAAATTGAGAACATTGCCAAGTCATGTGGCATGGTTGCAATTTTATCAACGGTAGCTTATCACTCAGCAGTCCGTGCAGGTTTAGTGAAAAGTTTTATCACGTTGAAAAACGGGAAATCCTCAGCTCGGTGGCCAAATCTTCCGTGGCTGCACACCGATACTTGGGTCAATAACTCGAGAAGTTCTGCTATTGAGGATTTATATGATCAGTGTGAATCTAAGAGTGGTGATATATGTTTCTTGCAGTTTACTTCAGGCTCAACTGGTGATGCTAAAGGAGTCATGATCACTCATGGAGGGCTAATTCACAATGTGAAGCTGATGAGAAGCAGATACAAGAGCACCTCAATGACAGTGCTAGTGAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGCGGTGGAACGGCCCTTCTGTTTTCACCGATGACATTCATCAAGAAACCACTCTTATGGATAGAAACCATGAGCAAGTATCAAGCAACTCACAGTGCCGGACCGAACTTTGCTTTTGAGTTAGTCGTTCGAAGGTTAGAGTCTGACAAGGATAAATTTCAGAATCTAGACCTTTCATCCATGATTTTTCTTATGGTTGCCGCAGAACCAGTGAGACAGAAGACTCTGAAAAGATTTCTTGAGCTAACCGGTCCTTATGGCTTGTCTCAAAAGGCGATGGCTCCTGGATACGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGCAATCCTATTCTTGTTGACTGGCAGGGACGAGTTTGCTGCGGATATATTCATCCGGGGAATGCAGATATTGACATCAGAATAGCTGATCCAGATAGCGGCGAAGAGCTTCAGGAAGATGGAAAGGAAGGAGAAATCTGGATCAGTAGTCCAAGTGCAGGAATAGGATACTGGGGGAAGGAAGAATTGAGTAAGCAAACCTTTAGAAACCAGCTTCCAAACCATCCTGGACGTGCCTACACAAGAACCGGAGACTTGGGAAGGATAATTGATGGAAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAATATATATTCCTCAGATGTTGAAAAGACGGTTGAGAGTTCGTCTGAATTTCTTCGTCCCGGATGCTGTGCTGTCATTGGGGTCCCTGAAGAAACTTTATCAGCAAAGGGGATTTCCTTGCCAGATGGTTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAACTGAGGGATGGTAAACCAGTTAGCAAAGATGTGGTTGACAATATTCAAACTCGTGTGGCTGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAAAACCATCAGCAAAACAACATCAGGAAAGATTAAAAGATTTGAATGTCTCAAACAGTTTGCGGATGGAACACTGAGTTTGGTACCACAACCTGTTTTGACAAAGAAAACACTACTAAGATCATTCACTACAGGAACGTGTAAAGAAGGAAGAACACCACGGGCGCGGTTAGCGAATAGTACACCTATAACTAGTCCAAGAATCAGTAACAAGGAAATTCTTGAATTCTTGAAAAGGCTTGTTTCTGAGCAGGCTGGAATCTCGGTAAGCAGCATCTCTGTCACAGACAACATGTCAACCTACGGAATGGATTCAATTAGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTCGGAGTTCCGGTTGCGGCTATCGATGTTTTCAGTGCATCCTGCATTGAAGAATTGGCCAACTTCCTCGGAAATCTTCTGTTGAAGTCTCAGCCTCACCTTCTAAACAACCAATCCTTTTCTCCAGAAGCTGAAACAGAATCTACTGAACTGTTTGTTGATGTGTCCAAGTCTCACCGATGGAGTATATGTTTCCTTCAACTCTTAGCACTTTTTTACATTTCTGTCCTGCTAGTTTCTCCTGCTTATTTATCTATCACAACTTTTCAAAGTCTCATAGAAAGAGTCGATAAATCATTATACATAATTCCTTGGTCAAACTATCTAATTTCACTTATTTTAGCACCACTTTCTTGGATCCTTTGCATTGCTTCTACATGCATTTGCATTTCATTTTTCGGAAATTCTTTCTTGAGGCCAAATTATGCTCTTTCTCCTGAAATATCCATCTATTCAATGGACTTTGTTAAGTGGTGGGCACTTTATAAAAGCCAGGAAATTTCTTCCAAAGTTCTGGCTATACACCTCAAAGGAACAGTTTTTCTGAAGTACTGGTTTGAGACACTTGGTGCAAGAATTGGATCCTCAGTTTTGATCGATACAGTTGACATAACCGACCCATCTCTGGTTTCAATTGGAGATGAAGCTGTCATTTCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAGTTCTAAGTCTCCATCCTATTAGAATCGGCCGAAATTCTTCCATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTCATCAAAGAAGGAGCTGAGGTACAACCACTACAGAAAGTTGAAGGAGGACAGCACGTGCTCAATCCTTCAAAGCTTAATAATGTTAAAGAGAATGCAGTGTTGCTTGTTACCACCAGCAAAACTGAGTCTAATGCTATATATCATTTTCTTGGGATTTATCTTGTTGGCTTTCTTAGTTCCCTTGCTGCAGCTATAACCTACTTCATGTATACATGGTTCTTCCAAAAACCTTCTTCATTCCAAAGCTTTTCATTTGTTTGCATATGTGGAGCCTTCCATTGGATTCCATTTACTCTTACTGCATATGCTACCATGTTTTCTGATGTTCCATCAAATCCCTTTGATTTTGCCATTTCATTTACATGTGCATACTTGCTTCATGGTCTCATTCTCACCTCTCTCACTTGTTCTTTGACTTTTTTACTCAAAAGTCAAAAGCAAACACACTTCAAAACAtggctacaacaacaactaatcctttcctgccaccttagatttgcAAAGCTGCTCTCAGGAACAGAAGCTTTCTGTGTATATTTACGTCTTCTCGGTGCCAAAATTGGCAAACATTGTTCCATTAGAGCCATCAATCCAGTTTCAAACCCTGAGTTAATGTCCATTGGTGATGGTGTTCATCTTGGTGACTTTAGCCGCATAATCACTGGTTTCAATTATTCCAATGGATATGCTTGTGGAAAAGTAGAGGTTCAAGATAACTCAGTTGTTGGTAGTCAAAGCTTAATTCTCCCTGGTTCTCTTGTTGAAAAGAATGTCATTCTAGGTGCACTTTCTTTTGCTCCAATGAATTCTATACTCCATGAAGGCAGTGTTTACATCGGATCTCAAACCCGAGTTACAATGAGGAACTTAGGAAATGCTAATTTTGATGAAAGAATAGAGGTGATGGACATGGACTACAAGAAAATAGTTGCAAATTTGGCAGCAAATTTAGCTGCAACAACTATGAATGCTAAAGCAAGATATTTTCATCGCATCGGTGTTAGTGGCAAAGGGCAGTTGAAAATATACAACAAACTTGATGAAAGTATTCCAATGCACAAGATTTTTCACCCTGGAAAAAGCTACCCTATCATAGTAAGACATAGTAATAGTCTGAGTGCTGATGATGATGCAAGAAGCGATGCGCGTGGTGCTGCTTTGAGGATACTTTCTGACGAACCTACGAAAGATTCTTCTTATTCTCATCCTTCTACTCTTATTGATTTAACACTAAAAACAGGAAATGCATTCTATGCTCGAAATCTCGCCGATTTTGCAAGCTGGCTTGTGTGTGGACAAGCTGCAAGGGAAGAACTCGTGAAGGCCGCTCCACATGTTGGCGATGCAGTGTGGAGTTCTCTCAGACAGGCTGATTCATATGCTGAACTGCATTACTACTCAAACTATTGCAGGCTCATGAGGTTCCAAGATGGAAAACAAATGTATGTGAAATTCAAGTTAAGGCCTTATGACACAAGCATCAATGAAGACAAAGGTAAAGTTAATCCAACAGGGATTCTTCCACCAGAGACAGGTACAATTCCTAGAGATGAAAACGATTTGCGTCCTTTGCTTTTCCTTGCTAATGATTTTCAAAACCGTGTTAGTTCCACCAATGGAGTTTCTTATGTTTTCCAAATGCAACTAAGACCCGTGCCAGATGAAGAACACGGCCGCGAGGTTGCGTTGGATTGTACTAAACCATGGGATGAAAACCAATTCCCTTTTATTGATGTTGGAGAGATTAACATCAACGAGAATCTTTCAATGGAAGATTCACAGAAACTTGAGTTCAATCCTTATCTCAGAAGCAATGAATTAGATGTGATTTCAGCTACTTCCAACACACAAAGTGCTTCAATTGATCATGGCCGTTCATTAATCTATGAGATTTGTCAGCATGTGCGCAATAGACAGCCACTCCCAGAAGCTTGGAGAAACCTCGTACAACAATCCAATGTTAAGGTTGACTTGTCCTGTTGTCCAATAGCATCATCATCACCATCATTACCTGAAAAAGAACCATTGCTGAAGAAAGCATCAACATTGACATTGACAAGAACATGGTATCAAACACTATCAGCACTCTTCATTCAACCATTGCTACAAACATTTTTACCTTACATGGTGATTGGTTTATCAGTTTTTGTTCCTCTAAACTTGGTTTTTTATTTTAAGGATGTTAAGAAACATCAACTGCATTGGTTGCTTCCACTTTTTTGGATTCTCTCAGGTACTTTGGCTGCATTAGCATGTGTTATAGCCAAAAGGGTTCTCATTGGAAAAAGGAAAGTTGGTGAAACAATACCAATATGGAGTATGAAAATTGTGATGGATAGTACATGGCAAGCTATTAGAACATTGGTTGGTGATTATTTCATGGATATGACAAAAGGGTCATTTTTGTTTGTTATTTGGATGAAGTTGATGGGATCAGACATTGACATGGATGGTTATGTTGATAGCATGGGAGCAATGTTGAATCCTGAAATGGTGAAGATTGAGAGAGGAGGTTGTGTTGGAAGAGAGGCATTGTTGTTTGGACATATATATGAAGGTGATGAAGGAGGGATGGTGAAGTTTGGTGAAATCAAAATTGGTGAAGATGGTTTTGTTGGGAGTAGAGCTGTGGTTATGCCTGGTGTTCAACTGGAGAATCAAGCTAATCTTGCTGCATTGTCTCTTGCCATGAAAGGAGAAATCATTAGATCAAGatag 6990 0.4 MDPERSIEEQLSKLHPSLPLNTRIGIVGAGPSGISAAYALARLGYNNITVLEKHHAVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSALEELDSHKLAVIDSSSGKYQDIKVADDYVSVMSLTLKIQEKVKNSGRFGVLAVSEIAADLTPEYLEHHGLKSVPKSVAYGYTASGYGFMQDMPYAYVHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPIKLHCNTEVLAIRRNSEIVAVNVKSSNEIETMEFDKIIVSGNFPLKYGRTYRLSPSTCIDCEAEVMDSSDIEKELFSKVEVNDYYTTVFKIKGLDHMPVGFYYFNEYMEDPSTIGNPVAMQKFYADTDIFLLWSYGNSFDIKGPTITELAIKNIESMGGEVESFILQRRFKYFPHVSSQDMKNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALMCKNFAKSSDLPVFPYTKSLFPLQTEFQRKEPKELAELPGVQFPDLPTLNSYLKHWGTHPVTQDRTLYSWINEEGKVIVKRTYREQHLNASCIASKLLKSHKPVIKPGDKVLLVYLPGLDFVDAFFGCLRAKVIPVPVLPPDPMQSGGQALLKIENIAKSCGMVAILSTVAYHSAVRAGLVKSFITLKNGKSSARWPNLPWLHTDTWVNNSRSSAIEDLYDQCESKSGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSRYKSTSMTVLVSWLPQYHDMGLIGGLFTALVSGGTALLFSPMTFIKKPLLWIETMSKYQATHSAGPNFAFELVVRRLESDKDKFQNLDLSSMIFLMVAAEPVRQKTLKRFLELTGPYGLSQKAMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYIHPGNADIDIRIADPDSGEELQEDGKEGEIWISSPSAGIGYWGKEELSKQTFRNQLPNHPGRAYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSEFLRPGCCAVIGVPEETLSAKGISLPDGSDQVGLVVIAELRDGKPVSKDVVDNIQTRVAEEHGVNVASVKLIKPKTISKTTSGKIKRFECLKQFADGTLSLVPQPVLTKKTLLRSFTTGTCKEGRTPRARLANSTPITSPRISNKEILEFLKRLVSEQAGISVSSISVTDNMSTYGMDSISVVKATQKLSDFLGVPVAAIDVFSASCIEELANFLGNLLLKSQPHLLNNQSFSPEAETESTELFVDVSKSHRWSICFLQLLALFYISVLLVSPAYLSITTFQSLIERVDKSLYIIPWSNYLISLILAPLSWILCIASTCICISFFGNSFLRPNYALSPEISIYSMDFVKWWALYKSQEISSKVLAIHLKGTVFLKYWFETLGARIGSSVLIDTVDITDPSLVSIGDEAVISEGVLVQSHEVKNGVLSLHPIRIGRNSSIGPYAVIQKGSVIKEGAEVQPLQKVEGGQHVLNPSKLNNVKENAVLLVTTSKTESNAIYHFLGIYLVGFLSSLAAAITYFMYTWFFQKPSSFQSFSFVCICGAFHWIPFTLTAYATMFSDVPSNPFDFAISFTCAYLLHGLILTSLTCSLTFLLKSQKQTHFKTWLQQQLILSCHLRFAKLLSGTEAFCVYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFNYSNGYACGKVEVQDNSVVGSQSLILPGSLVEKNVILGALSFAPMNSILHEGSVYIGSQTRVTMRNLGNANFDERIEVMDMDYKKIVANLAANLAATTMNAKARYFHRIGVSGKGQLKIYNKLDESIPMHKIFHPGKSYPIIVRHSNSLSADDDARSDARGAALRILSDEPTKDSSYSHPSTLIDLTLKTGNAFYARNLADFASWLVCGQAAREELVKAAPHVGDAVWSSLRQADSYAELHYYSNYCRLMRFQDGKQMYVKFKLRPYDTSINEDKGKVNPTGILPPETGTIPRDENDLRPLLFLANDFQNRVSSTNGVSYVFQMQLRPVPDEEHGREVALDCTKPWDENQFPFIDVGEININENLSMEDSQKLEFNPYLRSNELDVISATSNTQSASIDHGRSLIYEICQHVRNRQPLPEAWRNLVQQSNVKVDLSCCPIASSSPSLPEKEPLLKKASTLTLTRTWYQTLSALFIQPLLQTFLPYMVIGLSVFVPLNLVFYFKDVKKHQLHWLLPLFWILSGTLAALACVIAKRVLIGKRKVGETIPIWSMKIVMDSTWQAIRTLVGDYFMDMTKGSFLFVIWMKLMGSDIDMDGYVDSMGAMLNPEMVKIERGGCVGREALLFGHIYEGDEGGMVKFGEIKIGEDGFVGSRAVVMPGVQLENQANLAALSLAMKGEIIRSR 2329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02640 2329 SUPERFAMILY Trimeric LpxA-like enzymes 2149 2323 IPR011004 -
Car01g02640 2329 SUPERFAMILY Heme-dependent catalase-like 1696 2061 IPR020835 GO:0020037
Car01g02640 2329 Gene3D - 480 950 IPR042099 -
Car01g02640 2329 CDD FAAL 499 1070 IPR040097 GO:0008610
Car01g02640 2329 SUPERFAMILY ACP-like 1116 1196 IPR036736 -
Car01g02640 2329 SMART Phosphopantetheine attachment site 1122 1193 IPR020806 GO:0031177
Car01g02640 2329 ProSiteProfiles Carrier protein (CP) domain profile. 1119 1193 IPR009081 -
Car01g02640 2329 PANTHER AMP-BINDING ENZYME 1 2329 - -
Car01g02640 2329 Pfam AMP-binding enzyme 523 956 IPR000873 -
Car01g02640 2329 Gene3D - 23 445 IPR036188 -
Car01g02640 2329 PANTHER AMINE OXIDASE 1 2329 - -
Car01g02640 2329 ProSitePatterns Putative AMP-binding domain signature. 678 689 IPR020845 -
Car01g02640 2329 SUPERFAMILY FAD/NAD(P)-binding domain 21 271 IPR036188 -
Car01g02640 2329 SUPERFAMILY Trimeric LpxA-like enzymes 1343 1440 IPR011004 -
Car01g02640 2329 ProSitePatterns Phosphopantetheine attachment site. 1148 1163 IPR006162 -
Car01g02640 2329 Gene3D - 94 202 - -
Car01g02640 2329 SUPERFAMILY Trimeric LpxA-like enzymes 1602 1710 IPR011004 -
Car01g02640 2329 ProSiteProfiles catalase family profile. 1681 2329 IPR018028 GO:0004096|GO:0006979|GO:0020037
Car01g02640 2329 Gene3D Hexapeptide repeat proteins 1594 1704 - -
Car01g02640 2329 Gene3D - 303 396 - -
Car01g02640 2329 Gene3D - 951 1079 IPR045851 -
Car01g02640 2329 SUPERFAMILY Acetyl-CoA synthetase-like 493 1078 - -
Car01g02640 2329 PRINTS Adrenodoxin reductase family signature 23 45 - -
Car01g02640 2329 PRINTS Adrenodoxin reductase family signature 47 60 - -
Car01g02640 2329 Pfam Phosphopantetheine attachment site 1124 1189 IPR009081 -
Car01g02640 2329 Gene3D - 1110 1193 IPR036736 -
Car01g02640 2329 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Car01g02640 2329 Gene3D Hexapeptide repeat proteins 1351 1462 - -
Car01g02640 2329 Gene3D Catalase core domain 1705 2069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02640 Car-Chr1 52005462 52014333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02640 674 989 Monolignol Biosynthesis Gene Families AT1G20480 26.183 2.04e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02640 - - cam:101501314 4596.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02640 01 52005462 52014333 Car01g02640 01 52005462 52014333 ECH
Car01g02640 01 52005462 52014333 Car06g03662 06 68012407 68021543 PCT