Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02637 ATGGAGCGCAGAATAAGAGAGAGAGAGGCCAAGAAGCAGAAGTCAGAAAGAGGCAACCGTCAGGTTCTTGGAGATATTGGCAATCTTGAAGGGAATCAAACTTCACGACCCAACACAACGAACTTCCATTCAAAACAATTGGCAAATGCACAAACTGCAGCAAACCTGATACCAGGGTTACAAGTGCCAACTAATCACCAAGGAGTTGCACAAGGAGATCAAAATGTTGGTGAAGATCGGACCGATGAGCCAAAACCTGAGCCTATGGACGTGTCTTCTGAATCAGGAGAAAAACAAGATTTTGCTCCTAAAAAAAAGCGAAGATCTTCTGTGAAGGCTGCGACTCTGAATTCAGCACCTATAACAGAAAGCAAGAGTGCTAGCAGAATCTTGATTGAGCCCGAGGTTCAGCCTTCTGACTTGGCTACCAGAATCTCAATCGAACCTGAGGATCAGCCTTCTGACTCGGCTAGCAGCATCTCGATTGAACTCAAGGATCAGCCTCTTGACTTGGATGGAGATGATGCAACTAATAATTTGGCAGCATTTGAATATACTGATGAACTATACAATTTCTACAAGCTAACAGAAGAAGAAAGCCAAATTTATGATTACATGGAATCACAGCCAGAAATCAATATGAAAATGAGGACTATTCTTGTCAATGCCTTCTTGGATATATCAGCTAATGCTTATAACAGAAATCAGTTTATTTCAATGGAGAAAGATATTATTCAAAAGCTACGATGGAATTTTACAGTTCCTACACCCTATGTATTTTTAGTTCGACTTATCGGAGCCTCTATTGTGCAAGATAAAGAGATGGAGCACTTGGCATTTTACATAGCAGAACTTGGTCTTCTTCACTATCAAGTATTTTTATATTCCTCTTCAAATATTGCTGCCGCAGCTGTTTATTCTGCTCGTTGTATACTCAATAGGATTCCACATTGGACTCAAAATCTACATATCCTATCCGGTTACTGCAAACATCAGATAAAAGATTGCGCTAAGCTATTAGTGAGGATACATGCAAATGTAGCAGATAAGAAAAACCAAACAGTATATTTCAAATTCTTAAATAGTAACAAAGGTCATATTGCTCTATTACCACAGCCACATAACATCGAAGAAAGATTGTAG 1143 0.3937 MERRIREREAKKQKSERGNRQVLGDIGNLEGNQTSRPNTTNFHSKQLANAQTAANLIPGLQVPTNHQGVAQGDQNVGEDRTDEPKPEPMDVSSESGEKQDFAPKKKRRSSVKAATLNSAPITESKSASRILIEPEVQPSDLATRISIEPEDQPSDSASSISIELKDQPLDLDGDDATNNLAAFEYTDELYNFYKLTEEESQIYDYMESQPEINMKMRTILVNAFLDISANAYNRNQFISMEKDIIQKLRWNFTVPTPYVFLVRLIGASIVQDKEMEHLAFYIAELGLLHYQVFLYSSSNIAAAAVYSARCILNRIPHWTQNLHILSGYCKHQIKDCAKLLVRIHANVADKKNQTVYFKFLNSNKGHIALLPQPHNIEERL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02637 380 Pfam Cyclin, C-terminal domain 255 372 IPR004367 -
Car01g02637 380 MobiDBLite consensus disorder prediction 76 107 - -
Car01g02637 380 Gene3D - 242 379 - -
Car01g02637 380 PANTHER CYCLIN-B1-4 221 372 - -
Car01g02637 380 PANTHER CYCLIN-B1-4 14 225 - -
Car01g02637 380 SUPERFAMILY Cyclin-like 180 250 IPR036915 -
Car01g02637 380 PIRSF Cyclin_A_B_D_E 220 379 IPR039361 -
Car01g02637 380 PIRSF Cyclin_A_B_D_E 1 226 IPR039361 -
Car01g02637 380 SUPERFAMILY Cyclin-like 256 375 IPR036915 -
Car01g02637 380 PANTHER CYCLINS 221 372 IPR039361 -
Car01g02637 380 PANTHER CYCLINS 14 225 IPR039361 -
Car01g02637 380 MobiDBLite consensus disorder prediction 1 19 - -
Car01g02637 380 MobiDBLite consensus disorder prediction 26 74 - -
Car01g02637 380 CDD CYCLIN 253 341 IPR013763 -
Car01g02637 380 SMART Cyclin_C_2 255 373 IPR004367 -
Car01g02637 380 SMART cyclin_7 259 342 IPR013763 -
Car01g02637 380 MobiDBLite consensus disorder prediction 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02637 Car-Chr1 51979493 51982626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02637 221 371 Core Cell Cycle Gene Families AT2G26760 46.053 6.35e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02637 K21777 - oeu:111400590 195.282