Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02636 ATGGCTCCATCAGAGTTTTTTGTCCTAGTATATTACAATGGACATGTTGAGAGGACAAACATAGAAGGTGTTGTCTTTGCATGCGCAAATACATCATTGGTAAAAGTGAAAAAAAATATCAAACTTGATGGACTTATCAAATGTATCCAAACAAAGATCCAACCAGACAACTCACAAAGGGTGGTAGATGTTATTTACCGATACCCTATAACTCTTGCGCCAGGACATGTTCGATATGAATCGTTAAATCTCTTAGGAGATGATGACGTGCATATGATGTTTGACATGTTCATTGCAAGTAAATGCCTTGGTATTTCAACAATTGAAGTTTATGCACAGTTAGTAGATGATCCTAGAGACGACACACAAGGGAAGATCTTCTGTGAAGCCGCGACTCTGAATTCAGCACCTATAACAGAAAGCAAGAGTGCTAGCAGAATCTTGATTGAGCCCGAGGTTCAGCCTTCTGACTTGGCTACCAGAATCTCAATCGAACCTGAGGATCAGCCTTCTGACTCGGCTAGCAGCATCTGGATTGAACTCAAGGATCAGCCTCTTGACTTGGATGGAGATGATGCAACTAATAATTTGGCAGCATTTGAATATACTGATGAACTATACAATTTCTACAAGCTAACAGAAGAAGAAAGCCAAATTTATGATTACATGGAATCACAGCCAGAAATCAATATGAAAATGAGGACTATTCTTGTGGACTGGCTTGTTGAGATTCATTTGCATTTTCAATTAAGGACAGAGACACTCTTTATTACCATTAACATAATTGATAGATATCTCTCATTGAGTGATGTACCAAAAAAAGTGCTACAGTTAGTGGGAATATGTTCAATGCTCATTGCTATCAAATTTGAAGAGATATCACATCCTGAGGTCAATGCCTTCTTGGATATATCAGCTAATGCTTATAACAGAAATCAGTTTATTTCAATGGAGAAAGATATTATTCAAAAGCTACGATGGAATTTTACAGTTCCTACACCCTATGTATTTTTAGTTCGACTTATCGGAGCCTCTATTGTGCAAGATAAAGAGCTTTCTGAATCAGGAGAAAAACAAGATTTTGCTCCTAAAAAAAAGCGCAGGGGAAGATCTTCTATGAAGGCCGCGACTCTGAATTCAGCACCTATAACAGAAAGCAAGAGTGCTAGCAGAATCTTGATTGAGCCCGAGGTTCAGCCTTCTGACTTGGCTACCAGAATCTCAATCGAACCTGAGGATCAGCCTTCTGACTCGGCTAGCAGCATCTGGATTGAACTCAAGGATCAGCCTCTTGACTTGGATGGAGATGATGCAACTAATAATTTGGCAGCATTTGAATATACTGATGAACTATACAATTTCTACAAGCTAACAGAAGAAGAAAGCCAAATTTATGATTACATGGAATCACAGCCAGAAATCAATATGAAAATGAGGACTATTCTTGTGGACTGGCTTGTTGAGATTCATTTGCATTTTCAATTAAGGACAGAGACACTCTTTCTTACCATTAACATAATTGATAGATATCTCTCATTGAGTGATGTACCAAAAAAAGTGCTACAGTTAGTGGGAATATGTTCAATGCTCATTGCTATCAAATTTGAAGAGATATCACATCCTGAGGTCAATGCCTTCTTGGATATATCAGCTAATGCTTATAACAGAAATCAGTTTATTTCAATGGAGAAAGATATTATTCAAAAGCTACAATGGAATTTTACGGTTCTTACGCCCTATGTATTTTTAGTTCGACTTATCGGAGCCTCTATTGTGCAAGATAAAGAGGTAAACAATTCTACGCCATCTTCTACATCTTCTAcaatagaccacattaatagAGATAGAGAGAGAGAGGCCAAGAAGCAGAAGTCAGAAAGAGGCAACCGTCAGGTTCTTGGAGATATTGGCAATCTTGAAGGGAATCAAACTTCACGACCCATCACAACGTTCTGA 1956 0.3783 MAPSEFFVLVYYNGHVERTNIEGVVFACANTSLVKVKKNIKLDGLIKCIQTKIQPDNSQRVVDVIYRYPITLAPGHVRYESLNLLGDDDVHMMFDMFIASKCLGISTIEVYAQLVDDPRDDTQGKIFCEAATLNSAPITESKSASRILIEPEVQPSDLATRISIEPEDQPSDSASSIWIELKDQPLDLDGDDATNNLAAFEYTDELYNFYKLTEEESQIYDYMESQPEINMKMRTILVDWLVEIHLHFQLRTETLFITINIIDRYLSLSDVPKKVLQLVGICSMLIAIKFEEISHPEVNAFLDISANAYNRNQFISMEKDIIQKLRWNFTVPTPYVFLVRLIGASIVQDKELSESGEKQDFAPKKKRRGRSSMKAATLNSAPITESKSASRILIEPEVQPSDLATRISIEPEDQPSDSASSIWIELKDQPLDLDGDDATNNLAAFEYTDELYNFYKLTEEESQIYDYMESQPEINMKMRTILVDWLVEIHLHFQLRTETLFLTINIIDRYLSLSDVPKKVLQLVGICSMLIAIKFEEISHPEVNAFLDISANAYNRNQFISMEKDIIQKLQWNFTVLTPYVFLVRLIGASIVQDKEVNNSTPSSTSSTIDHINRDREREAKKQKSERGNRQVLGDIGNLEGNQTSRPITTF 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02636 651 SUPERFAMILY Cyclin-like 440 574 IPR036915 -
Car01g02636 651 PANTHER CYCLIN-B1-4 409 595 - -
Car01g02636 651 PANTHER CYCLIN-B1-4 171 349 - -
Car01g02636 651 SUPERFAMILY Cyclin-like 195 329 IPR036915 -
Car01g02636 651 MobiDBLite consensus disorder prediction 357 383 - -
Car01g02636 651 ProSitePatterns Cyclins signature. 479 510 IPR006671 -
Car01g02636 651 MobiDBLite consensus disorder prediction 597 651 - -
Car01g02636 651 Pfam Cyclin, N-terminal domain 207 329 IPR006671 -
Car01g02636 651 Pfam Cyclin, N-terminal domain 452 574 IPR006671 -
Car01g02636 651 SMART cyclin_7 239 323 IPR013763 -
Car01g02636 651 SMART cyclin_7 484 568 IPR013763 -
Car01g02636 651 Gene3D - 464 573 - -
Car01g02636 651 Gene3D - 219 328 - -
Car01g02636 651 CDD CYCLIN 478 566 IPR013763 -
Car01g02636 651 MobiDBLite consensus disorder prediction 610 629 - -
Car01g02636 651 CDD CYCLIN 233 321 IPR013763 -
Car01g02636 651 ProSitePatterns Cyclins signature. 234 265 IPR006671 -
Car01g02636 651 MobiDBLite consensus disorder prediction 636 651 - -
Car01g02636 651 PANTHER CYCLINS 409 595 IPR039361 -
Car01g02636 651 PANTHER CYCLINS 171 349 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02636 Car-Chr1 51967618 51976137 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02636 426 597 Core Cell Cycle Gene Families AT2G26760 54.651 5.43e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02636 K21777 - cam:105851909 238.039