Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02633 ATGGAGCGCAGAATAGGAGAGAGAGAGGCCAAGAAGCAGAAGTCAGAAAGAGGCAACCGTCAGGTTCTTGGAGATATTGGCAATCTTGAAGGGAATCAAACTTCACGACCCATCACAACGAACTTCTATGCAAAACAATTGGCAAATGCACAAACTGCAGCAAACCTGATACCAGGGTTACAAGTGCCAACTAATCACCAAGGAGTTGCACAAGGAAATCAAAATGTTGGTGAAGATCGGACTGATGAGCCAAAACCTGAGCCTATGGACGTGTCTAGTTCTGAATCAGGAGAAAAACAAGATTTTGCTCCTAAAAAAAAGCGCAGGGGAAGATCTTCTATGAAGGCCGCGACTCTGAATTCAGCACCTATAACAGAAAGCAAGAGTGCTAGCAGAATCTTGATTGAGCCCGAGGTTCAGCCTTCTGACTTGGCTACCAGAATCTCAATCGAACCTGAGGATCAGCCTTCTGACTCGGCTAGCAGCATCTCGATTGAACTCAAGGATCAGTCTCTTGACTTGGATGGAGATGATGCAACTAATAATTTGGCAGCATTTGAATATATTGATGAACTATACAATTTCTACAAGCTAACAGAAGAAGAAAGCCAAATTTATGATTACATGGAATCACAGCCAGAAATCAATATGAAAATGAGGACTATTCTTGTGGACTGGCTTGTTGAGATTCATTTGCATTTTCAATTAAGGACAGAGACACTCTTTCTTACCATTAACATAATTGATAGATATCTCTCATTGAGTGATGTACCAAAAAAAGTGCTACAGTTAGTGGGAATATGTTCAATGCTCATTGCTATCAAATTTGAAGAGATATCACATCCTGAGGTCAATGCCTTCTTGGATATATCAGCTAATGCTTATAACAGAAATCAGTTTATTTCAATGGAGAGAGATATTATTCAAAAGCTACAATGGAATTTTACAGTTCCTACACCCTATGTATTTTTAGTTCGACTTATCGGAGCCTCTATTGTGCAAGATAAAGAGATGGAGCACTTGGCATTTTACATAGCAGAACTTGGTCTTCTTCACTATCATGTATTTTTATATTCCTCTTCAAATATTGCTGCAGCAGCTGTTTATTCTGCTCGTTGTATACTCAATAGGATTCCACATTGGACTCAAAATCTACAAATCCTATCCGGTTACTGCAGACATCAGATCAAAGATTGCGCTAAGCTATTAGTGAGGATACATGCAAATGCAGCAGATAAGAAAAACCAAACAGTGTATTTCAAATTCTTAAATAGTAACAAAGGTCATATTGCTCTATTACCACAGCCACATAACATCGAAGAAAGATTGTAG 1332 0.3896 MERRIGEREAKKQKSERGNRQVLGDIGNLEGNQTSRPITTNFYAKQLANAQTAANLIPGLQVPTNHQGVAQGNQNVGEDRTDEPKPEPMDVSSSESGEKQDFAPKKKRRGRSSMKAATLNSAPITESKSASRILIEPEVQPSDLATRISIEPEDQPSDSASSISIELKDQSLDLDGDDATNNLAAFEYIDELYNFYKLTEEESQIYDYMESQPEINMKMRTILVDWLVEIHLHFQLRTETLFLTINIIDRYLSLSDVPKKVLQLVGICSMLIAIKFEEISHPEVNAFLDISANAYNRNQFISMERDIIQKLQWNFTVPTPYVFLVRLIGASIVQDKEMEHLAFYIAELGLLHYHVFLYSSSNIAAAAVYSARCILNRIPHWTQNLQILSGYCRHQIKDCAKLLVRIHANAADKKNQTVYFKFLNSNKGHIALLPQPHNIEERL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02633 443 MobiDBLite consensus disorder prediction 63 135 - -
Car01g02633 443 PIRSF Cyclin_A_B_D_E 2 442 IPR039361 -
Car01g02633 443 SUPERFAMILY Cyclin-like 319 438 IPR036915 -
Car01g02633 443 Gene3D - 205 316 - -
Car01g02633 443 Gene3D - 192 431 - -
Car01g02633 443 MobiDBLite consensus disorder prediction 1 37 - -
Car01g02633 443 SMART Cyclin_C_2 318 436 IPR004367 -
Car01g02633 443 CDD CYCLIN 219 307 IPR013763 -
Car01g02633 443 SUPERFAMILY Cyclin-like 181 315 IPR036915 -
Car01g02633 443 Pfam Cyclin, N-terminal domain 193 315 IPR006671 -
Car01g02633 443 PANTHER CYCLIN-B1-4 14 435 - -
Car01g02633 443 MobiDBLite consensus disorder prediction 1 19 - -
Car01g02633 443 MobiDBLite consensus disorder prediction 143 162 - -
Car01g02633 443 ProSitePatterns Cyclins signature. 220 251 IPR006671 -
Car01g02633 443 MobiDBLite consensus disorder prediction 63 77 - -
Car01g02633 443 MobiDBLite consensus disorder prediction 114 128 - -
Car01g02633 443 MobiDBLite consensus disorder prediction 78 107 - -
Car01g02633 443 PANTHER CYCLINS 14 435 IPR039361 -
Car01g02633 443 SMART cyclin_7 225 309 IPR013763 -
Car01g02633 443 SMART cyclin_7 322 405 IPR013763 -
Car01g02633 443 CDD CYCLIN 316 404 IPR013763 -
Car01g02633 443 Pfam Cyclin, C-terminal domain 318 435 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02633 Car-Chr1 51939865 51943659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02633 167 434 Core Cell Cycle Gene Families AT2G26760 50.558 4.08e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02633 K21777 - jre:109013760 346.665