Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02619 ATGAATGGTTCAGGTTTGGGTGCTGGGTTTTTGTCTGGTCCTAGTGGGGGTATTTTGGACCTGGAATCTCCATTTCACAGGCACCAACAGACTCAATTGGGCCATCCAAATGTAACTGGTCAACACCATATGAATATCATGACTGGTCTGGAAAATGATAACCGAATTGGCCTAATTGAAGTGAAAAACTTGAACGCGGCGTTGAGTTTTGGTAAAGGCAAGGCGATTGCAGAAGATGACTTGAGCGAAGATGATGAGCATGGTTATGCAGAAGATGGGAATTGCGAGAATTTCGACGGTGGCAAAGGTAAAAAGGGGTCACCTTGGCAGAGGATGAAGTGGACGGACAATGTGGTTGGTCTTCTTATAGCTGTGGTGAGTTGTGTTGGTGATGATGGCACAATTGGTGGTGTCGATGGTGTCAAAAGGAAATCAGGGGTTTTACAGAAGAAGGGTAAGTGGAAAACTGTTTCCAAGATAATGATAAGTAAAGGTTGTCATGTGTCGCCGCAACAGTGTGAGGACAAATTCAATGACTTGAATAAGAGGTATAAGAGATTGAATGAGATACTTGGAAGGGGAACTTGTTGTCAAGTGGTTGAAAATCCTGCACTAATGGATTCAATGCCCAACCTTACTGCTAAGTCCAAGGATGATGTTAGAAAGATATTGAGCTCAAAACACTTGTTTTATAAAGAGATGTGTGCATACCATAATGGGCAAAGGATACCAAATAGCCATGATCTTGACTTACACAGTTATTCATTAGAACACGGGAAGGACTCGAGAGATAATGATGGATCtgaggatgaagatgaggataacaatgaaagcgaggatgatgaGTTGGATAATGAAATTAATATTAATGCACATGGGCATGGAGGTAGGATGGAAGAAGTCTATGATAGAAATAAATTAAGTGAGGAAGATGGCCACTTTTGGCCACGATCTGTTGCTATGGAGAAACTTGAGGTTGAAATGGCAAGGGTTTTTCAAGACCCCGCAATGTCACCGTGGGAGCGAAGAGAGTGGATTAAGGTACAGCTGTTGCAGCTTCAAGAGCAAAATGTCGGCTACCAAGTCAGGGCTCTTGAACTTCAGAAACAGCGGTTTAAGTGGTTAAGATATTGCAGCAAAAAGGACCGGGAGCTGGAGAAGCTAAGGATGGAGAACAAGAGAATGAAATTGGAAAATGAACGCAGAATCTTGAAACTGAAGCAGAGAGAACTCGAGGCAGACGTCAGTAGGGCTGAGGTGTCCTTAGACCCTTCCTCCATTGGTATCAACAGGCCACAAGGAAGGGAACATATCAATTTGGGTAGACCGCAGTAG 1335 0.421 MNGSGLGAGFLSGPSGGILDLESPFHRHQQTQLGHPNVTGQHHMNIMTGLENDNRIGLIEVKNLNAALSFGKGKAIAEDDLSEDDEHGYAEDGNCENFDGGKGKKGSPWQRMKWTDNVVGLLIAVVSCVGDDGTIGGVDGVKRKSGVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALMDSMPNLTAKSKDDVRKILSSKHLFYKEMCAYHNGQRIPNSHDLDLHSYSLEHGKDSRDNDGSEDEDEDNNESEDDELDNEININAHGHGGRMEEVYDRNKLSEEDGHFWPRSVAMEKLEVEMARVFQDPAMSPWERREWIKVQLLQLQEQNVGYQVRALELQKQRFKWLRYCSKKDRELEKLRMENKRMKLENERRILKLKQRELEADVSRAEVSLDPSSIGINRPQGREHINLGRPQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02619 444 MobiDBLite consensus disorder prediction 266 284 - -
Car01g02619 444 MobiDBLite consensus disorder prediction 256 295 - -
Car01g02619 444 Pfam Myb/SANT-like DNA-binding domain 111 236 IPR044822 -
Car01g02619 444 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 12 418 - -
Car01g02619 444 Coils Coil 378 414 - -
Car01g02619 444 Gene3D - 114 186 - -
Car01g02619 444 MobiDBLite consensus disorder prediction 84 107 - -
Car01g02619 444 PANTHER F16F4.11 PROTEIN-RELATED 12 418 - -
Car01g02619 444 Coils Coil 350 370 - -
Car01g02619 444 MobiDBLite consensus disorder prediction 424 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02619 Car-Chr1 51797957 51800229 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car01g02619 Myb_DNA-bind_4 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02619 - - gmx:100798932 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02619 01 51797957 51800229 Car01g02619 01 51797957 51800229 ECH