Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02618 ATGATGGCTGATAGGAACCAACACCCAACATTGACACAAAAGTTTGTTACAACTTCCTATGGAGGTTTGGAAAGACATGTTCTGTTTAATCAAAAAATTTCATCAAAAAACTACACAAATGCAGGGTTGCAGCAGTATTATCCTGTGTTTGTTCCTTCTCCATCAGAGAAAAACTTTGCAAGCTTTGCAACTGATTTTCTCATGGGTGGAGTTTCTGCTGCAGTTTCAAAATCTGCAGCTGCTCCTATTGAACGTGTGAAGCTTCTGATTCAAAATCAAGATGAGATGATAAAGGCGGGGCGGCTTTCCGAACCATATAAGGGAATTGGAGAATGTTTTAGTAGAACAATCAAAGATGAAGGATTTGCTTCACTTTGGAGAGGAAACACTGTCAATGTTATCCGTTACTTCCCAACACAGGCTTTCAACTTTGCATTCAAAGACTACTTTAAGAAGCTATTTAACTTCAAGCAAGATAAGGATGGATATTGGAAATGGCTTGCAGGTAATGTGGCATCTGGTGCTGCAGCAGGAGCTTCATCTTCAGTATTTGTTTACTCGTTGGATTACGCTCGAACACGCCTTGCGAGTGATGCGAAGACAACGAAGAAAGGTGGAGAGAGGCAATTCAATGGCCTTATTGATGTGTACAAGAAGACATTAAAATCAGATGGTATTGCTGGTCTTTATCGTGGATTCAATGTTTCAATTGTTGGAATCATGGTTTACCGTGGTTTGTATTTTGGAATGTATGATTCTTTTAAGCCAATCCTCTTAGTAGGAAACTTACAGGATAGTTTTGTTGCTAGCTTTGCTCTAGGATGGCTAGTTACAGTTGGTGCTAGTGTTGCATCTTATCCTTTAGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCTGTCAAGTACAAGAGTTCTTTTGATGCTTTCTCACAAATTGTGAAAACTGAAGGTCCAAAATCTCTTTTCAAAggtgctggtgctaacattcttcgagctgttgctggtgctggtgTTCTTGCAAGCTATGATAAACTTCAGGTTCTTCTGCTTGGAAACAAATATGGTTCTGGTGGAGCTTAA 1089 0.3765 MMADRNQHPTLTQKFVTTSYGGLERHVLFNQKISSKNYTNAGLQQYYPVFVPSPSEKNFASFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGECFSRTIKDEGFASLWRGNTVNVIRYFPTQAFNFAFKDYFKKLFNFKQDKDGYWKWLAGNVASGAAAGASSSVFVYSLDYARTRLASDAKTTKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFNVSIVGIMVYRGLYFGMYDSFKPILLVGNLQDSFVASFALGWLVTVGASVASYPLDTVRRRMMMTSGEAVKYKSSFDAFSQIVKTEGPKSLFKGAGANILRAVAGAGVLASYDKLQVLLLGNKYGSGGA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02618 362 PRINTS Mitochondrial carrier protein signature 65 78 IPR002067 GO:0055085
Car01g02618 362 PRINTS Mitochondrial carrier protein signature 78 92 IPR002067 GO:0055085
Car01g02618 362 PRINTS Mitochondrial carrier protein signature 128 148 IPR002067 GO:0055085
Car01g02618 362 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Car01g02618 362 PRINTS Mitochondrial carrier protein signature 230 248 IPR002067 GO:0055085
Car01g02618 362 PRINTS Mitochondrial carrier protein signature 274 296 IPR002067 GO:0055085
Car01g02618 362 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 9 362 - -
Car01g02618 362 PRINTS Adenine nucleotide translocator signature 62 74 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Car01g02618 362 PRINTS Adenine nucleotide translocator signature 106 127 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Car01g02618 362 PRINTS Adenine nucleotide translocator signature 139 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Car01g02618 362 PRINTS Adenine nucleotide translocator signature 165 178 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Car01g02618 362 PRINTS Adenine nucleotide translocator signature 270 286 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Car01g02618 362 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 9 362 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Car01g02618 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 351 IPR018108 -
Car01g02618 362 SUPERFAMILY Mitochondrial carrier 58 347 IPR023395 -
Car01g02618 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 257 IPR018108 -
Car01g02618 362 Pfam Mitochondrial carrier protein 61 156 IPR018108 -
Car01g02618 362 Pfam Mitochondrial carrier protein 266 354 IPR018108 -
Car01g02618 362 Pfam Mitochondrial carrier protein 164 258 IPR018108 -
Car01g02618 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 60 153 IPR018108 -
Car01g02618 362 Gene3D Mitochondrial carrier domain 63 358 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02618 Car-Chr1 51793147 51794766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02618 2 362 Antiporters AT5G13490 71.688 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02618 K05863 - gmx:100800843 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02618 01 51793147 51794766 Car01g02618 01 51793147 51794766 ECH