Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02613 ATGGAGTTCTCAATAGAAGCTTTGGAGAGAGATCTAAATAACATGAGAAAATATTATGAGAGTGGAAAAACAAAAGAATCATCATGGAGAGAATCACAACTAAAAGGGTTGCGTAACTTTGTCATAGAAAATGAGGAAGAAATCTTGAAGGTTCTAAAGAAGGATTTAGGGAAGCATCATGTTGAGGCTTTTAGAGACGAGGTTGGAACCTTAAAGAGATCCATAGATTTGGCAATAAAGTCCTTCAAAAAATGGATGGTTGGCAAAGAGGCTAAACTGCCACAAATAGCACTACTTTCAAGTGCAGAAATTGTTCCTGAGCCACTTGGTCTAGTTCTAATAATCTCATCATGGAATTTTCCCTTTGGAGTGTCCTTGGAGCCATTAATAGGAGCTGTAGCAGCTGGAAACAGTGTACTTCTAAAACCATCAGAACTGGCCCCTGCTTCTTCTTCTCTTCTAGCTAATGTTTTACCAAATTATTTGGACAATAATGGCATTAAGATCATTGAAGGTGGACCTGAAGTTGGAGAGCAACTCCTCCACCAAAAATGGGACAAGATTTTCTTTACAGGAAGTGCAAGGGTAGGACGGCTTGTTATGAAAGCAGCAGTGGAACATCTCACACCTGTAACTTTGGAGTTAGGTGGAAAATGTCCAGCACTCGTTGATTCACTTTCAGCTACTTGGGACACTGAGGTGGCTGTGAAACGAATTTTGGTGGCAAAGTATGGGGCTTGTGCAGGACAAGCATGCATAGCAATTGATTATGTCCTTGTAGAAAAGAGTTTCAGTTCCACATTGGTGGAGTTAATGAAAGAAGGGATTAAGAAAATGTTTGGAGACAACCCAAAAGCATCTAACACCATTGCAAGGATAGTTAATAAAAAGCATTCTAATAGAATCAAGAGTCTTCTAAGTGAACCTAAGGTTAAAGAATCGGTGGTTTTTGGTGGTTCCATGGACGATGATGACTTATTTATTGAACCAACAATATTATTGGATCCGCCACTTGATTCAGCAATCATGACAGAAGAAATCTTTGCCCCCCTACTTCCCATAATCACTCTGGAGAAGATTGAAGACGGTATTAAGTTCATAAAGTCAAAGCCTAAACCTTTAGCAATCTACGTCTTCACCAAAAGCAAAACTCTGCAGAGAAGAATGGTATCTGAAACATCATCTGGGAGTATTGTATTTAATGATGCAATTATACAGTATGCGGTCGATACCCTCCCATTTGGAGGAGTTGGTGAAAGCGGATTAGGCAGGTACCATGGGAAGTTCTCCTTTGATACATTCAGTCATCATAAGGCTGTGGCTAGGAGAAGTTTCTACACTGATTTTTGGTTCAGGTTTCCTCCATGGACTCTTGAAAAGTTCCAGCTACTTGAAGAAGCTTACAATTTAGACTACATTGGAATACCTCTCGCCATACTTGGCTTAAAGAAATCAAAACGCTCATTATATCAGGCTTGTGATTGA 1485 0.3973 MEFSIEALERDLNNMRKYYESGKTKESSWRESQLKGLRNFVIENEEEILKVLKKDLGKHHVEAFRDEVGTLKRSIDLAIKSFKKWMVGKEAKLPQIALLSSAEIVPEPLGLVLIISSWNFPFGVSLEPLIGAVAAGNSVLLKPSELAPASSSLLANVLPNYLDNNGIKIIEGGPEVGEQLLHQKWDKIFFTGSARVGRLVMKAAVEHLTPVTLELGGKCPALVDSLSATWDTEVAVKRILVAKYGACAGQACIAIDYVLVEKSFSSTLVELMKEGIKKMFGDNPKASNTIARIVNKKHSNRIKSLLSEPKVKESVVFGGSMDDDDLFIEPTILLDPPLDSAIMTEEIFAPLLPIITLEKIEDGIKFIKSKPKPLAIYVFTKSKTLQRRMVSETSSGSIVFNDAIIQYAVDTLPFGGVGESGLGRYHGKFSFDTFSHHKAVARRSFYTDFWFRFPPWTLEKFQLLEEAYNLDYIGIPLAILGLKKSKRSLYQACD 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02613 494 PANTHER ALDEHYDE DEHYDROGENASE 6 492 IPR012394 GO:0006081
Car01g02613 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Car01g02613 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Car01g02613 494 SUPERFAMILY ALDH-like 12 457 IPR016161 GO:0016491
Car01g02613 494 Pfam Aldehyde dehydrogenase family 16 440 IPR015590 GO:0016491
Car01g02613 494 PIRSF ALDH 2 475 IPR012394 GO:0006081
Car01g02613 494 PANTHER ALDEHYDE DEHYDROGENASE 6 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02613 Car-Chr1 51760128 51764604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02613 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 53.306 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02613 K00128 - gmx:100819197 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02613 01 51760128 51764604 Car01g02613 01 51760128 51764604 ECH
Car01g02613 01 51760128 51764604 Car06g03641 06 67720975 67730897 PCT