Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02601 ATGTTGCTTTCTCTTCCTCCCACTCACCGATCTTTTCTTCAACCACTTTTATTCCTCCGAAACCAAAACCAATCAACTTCTTCTCCTTCTTCAATTTCCACACCCAATTACAAAATCAGCCACCAAAAACGCGTGCTTCATTTTTCATGCTGCTACACAAACAGAAAGCAGCATGAAAACAAAGGAACAAGTAGCAGCAATAGAAGAATAAATGTAGTTGTTAGAGCAAGGCgtggtggtggtgttggtggcggtgAGTCTCCCTATGAAGTTCTGGGTTTGTCTCCTTCCGCGTCTGTCAATGAAATCAAAAAGGCATATCGGAAACTCGCTCTCAAGTATCATCCTGATGTCAATAAACAGGATAAAGCACAAGAGAAATTTATGAGGATAAAACATGCATACAATACGTTGTTGAATTCTAGTTCGCGCAAAAAATATGATTCTGGAAGTCGTGGTTCTAATTCTTCTCAAAGAAGCCAAAGTTGGAATCAACAGGCTGAAGAAGAATTTTATGGATTAGGAGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAACTGGGAAGCCAATGCGGCTTCACAAGGAAAGCCGAAGAGCCTATGGGAGGAATTGGCGGACATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAGCTCAATATTGTTGATCCAAATGACAATCCTCAGGGAGGAAATCCATCTAATTTATATGGGACAGAGACACCAAGCAACAACACTCAAGATGAAACTAGCAAGGGAAATACCAGCGTTGAGGATAACCTTGATGAAATAGAAGCAACTCTAGCTCGGTTAAAGAAGGAGTTAGGCTTATAG 837 0.3907 MLLSLPPTHRSFLQPLLFLRNQNQSTSSPSSISTPNYKISHQKRVLHFSCCYTNRKQHENKGTSSSNRRINVVVRARRGGGVGGGESPYEVLGLSPSASVNEIKKAYRKLALKYHPDVNKQDKAQEKFMRIKHAYNTLLNSSSRKKYDSGSRGSNSSQRSQSWNQQAEEEFYGLGDFFKDLQEEFRNWEANAASQGKPKSLWEELADIGEEFVEFLEKELNIVDPNDNPQGGNPSNLYGTETPSNNTQDETSKGNTSVEDNLDEIEATLARLKKELGL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02601 278 Coils Coil 255 278 - -
Car01g02601 278 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 55 276 - -
Car01g02601 278 MobiDBLite consensus disorder prediction 226 255 - -
Car01g02601 278 PRINTS DnaJ domain signature 89 107 IPR001623 -
Car01g02601 278 PRINTS DnaJ domain signature 107 122 IPR001623 -
Car01g02601 278 PRINTS DnaJ domain signature 123 143 IPR001623 -
Car01g02601 278 Pfam DnaJ domain 88 148 IPR001623 -
Car01g02601 278 MobiDBLite consensus disorder prediction 222 263 - -
Car01g02601 278 Gene3D DnaJ domain 85 194 IPR036869 -
Car01g02601 278 ProSitePatterns Nt-dnaJ domain signature. 128 147 IPR018253 -
Car01g02601 278 SUPERFAMILY Chaperone J-domain 7 147 IPR036869 -
Car01g02601 278 CDD DnaJ 88 140 IPR001623 -
Car01g02601 278 ProSiteProfiles dnaJ domain profile. 87 151 IPR001623 -
Car01g02601 278 MobiDBLite consensus disorder prediction 142 166 - -
Car01g02601 278 SMART dnaj_3 86 143 IPR001623 -
Car01g02601 278 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 55 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02601 Car-Chr1 51671662 51675781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02601 89 149 C2H2 Transcription Factor Family AT1G74250 40.299 2.96e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02601 - - mtr:MTR_2g097690 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02601 01 51671662 51675781 Car01g02601 01 51671662 51675781 ECH