Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02593 ATGTTTTCTCCAAACTCCTTTCTGCATGATTTTGGTGATCCCAACTCATTGAATCCAATAACAAATGGGTTTGAGTTGGATGATTCATCTTCACCTTCTTCAATCATAAGCTCAAATGAAGAATCTTCATCAGAAGTGACTAGATATTCCAACCACATCCTCGGATTCATAAGTGACATCCTCATGGATGAAGAAGATGAGTTGGAGCGCAAACCTTGTATGTTGCAGCAATGTTTAAGACTCCAAGCAGCCGAAAAATCTTTCTATGATGTTCTTGTACATAACTATCCTTCATCTTATGATGATAGCACTGACCCAGATGTAAATTTTGGTCGAACCGCTAGTTTTGAGAGCAATAGCAGCAGCTGCACCACTGATAACTCATGTGAATCTGATTCTGTCAACCTTGTTGGCGAATTTGACTGTTCTTCTTCACAGCTACAAAACTCTTTATTAGAAGAAAAAAACTACTATAATGTTACAGAACCTGATCCAGTGGTGATTGAATCACAAGCTGCTAGTGCTAGCCATTTTCAAAATGGAACATGGAATTCTATTCAGCCAGTGATGGTGGTGGAAGAGGTTTCAGCTTCAGTAGTACCAATATCAAGAGAAAAGAGAAGTCATAAGATGAATGATGATGATACTTGTAATGAACAAGAGGGAAGAGGTAGTAAACTTTCAGCTAATTTCTCTGATGAATTAGAGCCACCAGAGATATTAGATGAGGTGCTGCTTTGCCAAACAGGAAGGACTCAACAACACCAACCGTCGTCACAGAATGTTGATTCAGGACGAAAGGCAGCCGCAAAAAATTCGCGTTCGAAGAGAGTGTTGGCCAACAATGCTGCAGCTGTGGATTTGTGGACTATGCTAACTCAATGTGCACAGGCTGTGGCAAGCTACGATCAAAGGAATGCAAATGAGCTGCTCAGGCAGATTAGGCAACACTCTTCGCCTTTTGGTGATGGACTCCAGCGATTAGCTCATTACTTTGCTAATGGTCTTGAGATAAGATTGGCTGCCGAAACGCCTTCGTATATGCCACTTGATGTATCAACTGCTGGAGATATGTTGAAAGCTTACAAATTATTTGTTACCGCGTGTCCTTTGCAGAGAATGACAAATGTATTGACAACTAAAACGATTTTTAGTCTAGTGAAGAATGAGGCAAGTGTTCATGTTATTGATTTCGGCATTTGCTATGGTTTCCAATGGCCCTGCCTCATCAAGACTCTGTCAGCAAGACCTGGTGGTCCTCCGAAGCTTCGAATTACAGGAATTGAGCTTCCTCAGCCGGGATTTAGGCCTGCAGAGAGAGTGGAGGAGACGGGGCGGCGTTTAGAAAACTACTGCAAGAAGTTCAATGTTCCATTTGAATACAACTGTCTTGCACAGAAATGGGAAACTGTCCGGCTCGAAGATCTAAAGATAGACAGAAATGAAATAACTGTTGTTAGTTGTTTGTACAGACTGAAGAACCTGCTGGATGAAACTGTGGCAGTGAATTGTCCAAGAGAAGCTGTGTTGAAGCTGATAAGGAAGATTAATCCAAACATCTTCTTCCATGGAGTTGTCAATGGAAGTTATAGTGCACCGTTTTTCTTGACTCGGTTTAGAGAAGCACTTTACCACTTCTCATCAACGTTTGATGTGTTTGAGGCTAACGTGCCTCGAGAAGACACGCAGAGGTTGATGCTTGAGAAAGGGTTGTTTGGAAGGGATGCCATAAACGTTATCGCGTGTGAGGGGGCGGAGAGGGTTGAAAGGCCTGAGACCTACAAGCAGTGGCAGGTGAGGAATAGGAGAGCTGGTTTCAAGCAACTCAGGTTGGATCCTGAGTTAGTGAATGATACCAAAGCAATGATGAAGAGGGAATACCATAAAGATTTTGTGGTTGATGAGGATGGTAAATGGATTTTGCAGGGGTGGAAAGGGCGTGTTTTGAATGCTTTTTCTGCTTGGGTTCCTGCTTAA 1977 0.4249 MFSPNSFLHDFGDPNSLNPITNGFELDDSSSPSSIISSNEESSSEVTRYSNHILGFISDILMDEEDELERKPCMLQQCLRLQAAEKSFYDVLVHNYPSSYDDSTDPDVNFGRTASFESNSSSCTTDNSCESDSVNLVGEFDCSSSQLQNSLLEEKNYYNVTEPDPVVIESQAASASHFQNGTWNSIQPVMVVEEVSASVVPISREKRSHKMNDDDTCNEQEGRGSKLSANFSDELEPPEILDEVLLCQTGRTQQHQPSSQNVDSGRKAAAKNSRSKRVLANNAAAVDLWTMLTQCAQAVASYDQRNANELLRQIRQHSSPFGDGLQRLAHYFANGLEIRLAAETPSYMPLDVSTAGDMLKAYKLFVTACPLQRMTNVLTTKTIFSLVKNEASVHVIDFGICYGFQWPCLIKTLSARPGGPPKLRITGIELPQPGFRPAERVEETGRRLENYCKKFNVPFEYNCLAQKWETVRLEDLKIDRNEITVVSCLYRLKNLLDETVAVNCPREAVLKLIRKINPNIFFHGVVNGSYSAPFFLTRFREALYHFSSTFDVFEANVPREDTQRLMLEKGLFGRDAINVIACEGAERVERPETYKQWQVRNRRAGFKQLRLDPELVNDTKAMMKREYHKDFVVDEDGKWILQGWKGRVLNAFSAWVPA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02593 658 MobiDBLite consensus disorder prediction 19 42 - -
Car01g02593 658 MobiDBLite consensus disorder prediction 250 268 - -
Car01g02593 658 MobiDBLite consensus disorder prediction 203 230 - -
Car01g02593 658 ProSiteProfiles GRAS family profile. 279 656 IPR005202 -
Car01g02593 658 MobiDBLite consensus disorder prediction 250 275 - -
Car01g02593 658 MobiDBLite consensus disorder prediction 203 221 - -
Car01g02593 658 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 9 657 - -
Car01g02593 658 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 657 IPR005202 -
Car01g02593 658 Pfam GRAS domain family 290 655 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02593 Car-Chr1 51615937 51618587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02593 6 657 GRAS Transcription Factor Family AT2G37650 40.871 3.91e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car01g02593 GRAS 2.3e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02593 - - cam:101504630 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02593 01 51615937 51618587 Car01g02593 01 51615937 51618587 ECH
Car06g03599 06 67335101 67336402 Car01g02593 01 51615937 51618587 ECH
Car01g02593 01 51615937 51618587 Car06g03603 06 67357662 67360357 PCT