Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02592 ATGGATCCAAACTTTGTCGGAATCGACAACCATGGTAACCTACTACTTGTCTCTGATCCTAATTCAATCACTGATCCTTATTTATATCTACCCGATGTGGGTCCACTTGATTTTGATCCGAGTTCAAACTCGCTCTTCAACTCGTACCAACTCGTTCCTTCTTCTTCTTCTTCAAATGTCAACAACACTACCACCGATCATTCTTTTGAAGACACTGATTTTTCAGAAACTGTTAAATACATAAGTCAGATTCTAATGGAAGAGGATTTTGAACAAAAACCTTGTATGTGTTATGATCCACTTAGTCTTCAACACACTGAGAAATTTTTCTTTGATGCTTTGGAATCAAATTTCCCTCTTTCACCTAATCAACACCCTCTTGATATTCTTGAAATCCCTGATAGGAATTGTTCAACTACTTCTACTACTACTGATTCTGGAAACAGTTCTAGTTCTAATGACTTGAAGCCTCTTTCTCCTGATACACCAGTTTCTGGTACTGATTTTGCTTTCAATTCAATTTCTCATGTGAAGTCTcaatttattgttcctcaacataataataataataataataataTTAGTGATGGGGTTTTGGATTTGGATTCTTCTGAAACTAAGATTTTGGCTCAGAATATATTTAGTGATGCTGATTCTATGTTGCAGTTTAGGAAAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTAAAAAAACTCAGCTTTTTACTGGTTTGGAGAATAATACTAATAGTTTGGTGTCTCAAGAGGGTAAGGGAAAGGTGGGGGTAATTAAGATGGAGGGTGGTGGTCTTAGGGGAaattcgaattcaaattcgaataattggagttattcgaatttgaattcACATGGTTTGTTGAAGAGTAGAAAGAATCACGAGCGACAAGGTAGTGATGATGAAGAAGGAAGGAGCAACAAGCAGTCTGCAGTTAGTGTTGAGGAGAGTGAAATATCTGAGATGTTTGACCGGGTTTTGCTTAGTGTCGAAAATGTGCCGCTGTGTGCTGAAGAAAAAGATGGATCAGTGGTGGAGAGTAGTAGCACACAGCATGGTGAACTGGATGGAGGGAAGGCGAGGTCGAAGAAACAAGCGAGGAAGAGGGAAACGATCGATTTGAGGACACTTTTGGTTCTTTGTGCACAAGGTGTGTCTGCCAATGATAACAGGACTGCTAATGAATTGTTAAAGCAAATTAGGCAGCATTCTTCTCCATTAGGTGATGCATCACAGAGGTTGGCTCATTATTTCGCGAATGCGATTGAAGCACGGATGGTTGGTGCTGATACTGGAACACAAATATTCTATATGAGCCACAAGATGCTAAGTGCTGCTGATTACTTGAAAGCTTACCAAGTTTTTATATCTGCTTGCCCTTTCAAAAAGTTTGCACATTTCTTTGCAAATAAAATGATTATGAAAACAGCTGAAAAGGCAGAAACCCTTCACATCATTGATTTTGGTATCTTATATGGTTTTCAGTGGCCAATTCTTATCAAGTTTTTGTCAAAAAGAGATGGGGGACCACCCAAGCTACGGATCACCGGAATTGAGTATCCTCAAGCTGGGTTTCGACCAGCTGAGAGAATTGAGGAAACTGGCCGGCGTTTAGCTAAATATTGTGAGCGTTTCAATGTTTCCTTTGAATACAAGGCCATACCGTCACGAAACTGGGAGACCATTCAAATTGAAAACCTTAACATTAGGCAGAATGAGGTTGTTGCTGTGAACTGCTTGGTAAGGTTTAAGAATTTACTTGATGAGACAATTGAAGTGAACAGTCCTAAAAATGAAGTTCTGAAGTTAATTAAGAAGATAAATCCGAGTATATTTGTTCAATCAATAGTAAATGGATCCTATAACGCCCCTTTCTTTGCCACGCGCTTCAGGGAGTCGCTTTTTCATTATTCTGCAATTTTCGATATGTATGATACTCTCATATCACGTTCAAATGAATGGAGATTGATGATTGAGAGAGAGTTTTTGGGTAGGGAGATTATGAATGTTGTAGCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCTGAGGCATATAAACAGTGGCAGGTTCGAAATACAAGGGCTGGTTTTAGGCAGCTCCCGCTGGATAAGGAGATAATGACCAAATTTAGAGATAAATTAAGAGAATGGTACCACAAAGATTTTGTCTTTGATGAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTTTGTATGCTTCGACTTGTTGGGTGCCAGAGTAA 2262 0.3815 MDPNFVGIDNHGNLLLVSDPNSITDPYLYLPDVGPLDFDPSSNSLFNSYQLVPSSSSSNVNNTTTDHSFEDTDFSETVKYISQILMEEDFEQKPCMCYDPLSLQHTEKFFFDALESNFPLSPNQHPLDILEIPDRNCSTTSTTTDSGNSSSSNDLKPLSPDTPVSGTDFAFNSISHVKSQFIVPQHNNNNNNNISDGVLDLDSSETKILAQNIFSDADSMLQFRKGLEEASKFLPKKTQLFTGLENNTNSLVSQEGKGKVGVIKMEGGGLRGNSNSNSNNWSYSNLNSHGLLKSRKNHERQGSDDEEGRSNKQSAVSVEESEISEMFDRVLLSVENVPLCAEEKDGSVVESSSTQHGELDGGKARSKKQARKRETIDLRTLLVLCAQGVSANDNRTANELLKQIRQHSSPLGDASQRLAHYFANAIEARMVGADTGTQIFYMSHKMLSAADYLKAYQVFISACPFKKFAHFFANKMIMKTAEKAETLHIIDFGILYGFQWPILIKFLSKRDGGPPKLRITGIEYPQAGFRPAERIEETGRRLAKYCERFNVSFEYKAIPSRNWETIQIENLNIRQNEVVAVNCLVRFKNLLDETIEVNSPKNEVLKLIKKINPSIFVQSIVNGSYNAPFFATRFRESLFHYSAIFDMYDTLISRSNEWRLMIEREFLGREIMNVVACEGFERVERPEAYKQWQVRNTRAGFRQLPLDKEIMTKFRDKLREWYHKDFVFDEDNNWMLQGWKGRILYASTCWVPE 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02592 753 MobiDBLite consensus disorder prediction 294 313 - -
Car01g02592 753 MobiDBLite consensus disorder prediction 343 371 - -
Car01g02592 753 MobiDBLite consensus disorder prediction 270 288 - -
Car01g02592 753 MobiDBLite consensus disorder prediction 134 162 - -
Car01g02592 753 ProSiteProfiles GRAS family profile. 369 751 IPR005202 -
Car01g02592 753 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 752 IPR005202 -
Car01g02592 753 MobiDBLite consensus disorder prediction 294 321 - -
Car01g02592 753 PANTHER SCARECROW-LIKE PROTEIN 34 52 752 - -
Car01g02592 753 MobiDBLite consensus disorder prediction 269 288 - -
Car01g02592 753 Pfam GRAS domain family 378 750 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02592 Car-Chr1 51608439 51611565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02592 77 752 GRAS Transcription Factor Family AT1G07530 50.214 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car01g02592 GRAS 2.3e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02592 - - cam:101504630 1473.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02592 01 51608439 51611565 Car01g02592 01 51608439 51611565 ECH
Car01g02592 01 51608439 51611565 Car06g03599 06 67335101 67336402 PCT
Car06g03602 06 67350334 67352374 Car01g02592 01 51608439 51611565 PCT