Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02584 ATGGGAGTTTGTTTGAGTGCTCAAATTAAAGCTGAAAGTCCTTATAACACTGGGTTAAATTCAAAGAGTGCAGGTTCAATTGGAAATGATCTGAGCAGCACAAACAACAGTAAGGATTCAGCTGTATCAGTGCCTCAGACTCCTCGAAGCGAGGGCGAGATCTTGCAGTCATCCAATTTAAAGAGTTATACCTTAGCAGAACTTAAGGCAGCAACTAGAAATTTTCGTCCCGATAGTGTGTTGGGAGAAGGTGGTTTTGGATCAGTTTTTAAGGGTTGGATTGATGAGAATTCATTGGCTGCTACCAAACCTGGCACTGGTATTGTTATTGCTGTTAAAAGACTTAATCAAGATGGTTGCCAAGGTCACAGGGAGTGGTTGGCTGAAGTCAACTATCTTGGACAGTTTTCTCATCCTCATTTAGTGAGATTGATCGGTTATTGCCTTGAAGATGAACACCGACTTCTCGCTTATGAGTTTATGCCTCGTGGAAGCTTGGAGAATCACTTGTTCAGGAGAGGTTCATATTTTCAACCTCTTTCTTGGAGTCTCCGTCTAAAGGTTGCTCTTGATGCTGCCAAAGGGCTTGCATTTCTGCACAGTGCTGAAACAAAAGTGATATATAGAGATTTTAAGACTTCAAATATCTTGTTGGATTCTGATTATAAAGCAAAGCTTTCTGATTTCGGGTTGGCAAAGGATGGTCCAACAGGTGACAAAAGCCATGTCTCCACCAGGGTAATGGGAACTTATGGATATGCAGCTCCTGAATATCTAGCAACAGGTCATCTAACTACTAAGAGCGATGTCTATAGTTTTGGAGTTGTCCTGCTCGAAATGTTGTCCGGTAAGAGGTCAGTTGACAAGAATAGGCCATCTGGACAACACAACTTGGTGGAATGGGCTAAACCATATCTAGCTAACAAACGTAAGATTTTCAGCGTGTTAGACAGCCGGCTCGAAGGGCAATATTCAACCGATGAGGCCTACAAGATAGCCACCCTTGCTTTGCGATGCTTATCAACAGAATCCAAGTTCAGGCCCAACATGGATGAAGTTGTTATAACTTTGGAGCAGCTGAAAGTTCCTAATCTGAATGCAGGCAGTCAAAAGCGTGCTCGGAGAAAAAGTGCTGATGATGTTAGCCATGCTCGGAGAAAAAGTGTTGATGGTGTTAACCGTCCGAAGATTCCCACAACGTATCCCCGTCCCTCGGCATCTCCTCTCTATGCTTGA 1236 0.4337 MGVCLSAQIKAESPYNTGLNSKSAGSIGNDLSSTNNSKDSAVSVPQTPRSEGEILQSSNLKSYTLAELKAATRNFRPDSVLGEGGFGSVFKGWIDENSLAATKPGTGIVIAVKRLNQDGCQGHREWLAEVNYLGQFSHPHLVRLIGYCLEDEHRLLAYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALDAAKGLAFLHSAETKVIYRDFKTSNILLDSDYKAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTTKSDVYSFGVVLLEMLSGKRSVDKNRPSGQHNLVEWAKPYLANKRKIFSVLDSRLEGQYSTDEAYKIATLALRCLSTESKFRPNMDEVVITLEQLKVPNLNAGSQKRARRKSADDVSHARRKSVDGVNRPKIPTTYPRPSASPLYA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02584 411 MobiDBLite consensus disorder prediction 18 53 - -
Car01g02584 411 PANTHER OS01G0588500 PROTEIN-RELATED 25 383 - -
Car01g02584 411 CDD STKc_IRAK 81 360 - -
Car01g02584 411 Gene3D Transferase(Phosphotransferase) domain 1 161 385 - -
Car01g02584 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Car01g02584 411 MobiDBLite consensus disorder prediction 372 392 - -
Car01g02584 411 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 25 383 - -
Car01g02584 411 ProSiteProfiles Protein kinase domain profile. 75 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02584 411 Pfam Protein tyrosine and serine/threonine kinase 79 355 IPR001245 GO:0004672|GO:0006468
Car01g02584 411 SUPERFAMILY Protein kinase-like (PK-like) 44 354 IPR011009 -
Car01g02584 411 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Car01g02584 411 MobiDBLite consensus disorder prediction 366 411 - -
Car01g02584 411 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02584 Car-Chr1 51532341 51535480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02584 38 357 Glycoside Hydrolase AT3G07070 45.921 1.15e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car01g02584 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02584 - - gmx:100798404 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02584 01 51532341 51535480 Car01g02584 01 51532341 51535480 ECH
Car01g02584 01 51532341 51535480 Car06g03592 06 67256853 67260720 PCT