Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02580 ATGGGAAAACAATTGATTAGTTCAGAGGAATCCAATGTTCAAATTCAGGAAACTAATGTAGGATGCATGTGGGGCATGTTTCATATTCTTGATTATCATCATTGGCGTGTCAAAAAGGCTTTTCATCACAAAAAGAAAAGACATGCAAGATATAAGAAAAAAACCACTTTGCAAGATCAACAAAATGTAGTTACAGTAGCAGAAGAACCCTTCTCGGTCAGCAAACATAGCAAAAAGTTGAATGCTACCGAGGAATACTCAGGAACAAACCAGGCCAGTAGTGATTATGCACTTCAACAGAAGAAAGATGGAAAGAAAACAGAAGGTTCCCTTAACAGAGAAATTTCCATTAAACTTAAGAATCATGATGATGTTGTGGAGGTAATTAGTATGAAGAAAAATGTATTGCTAAAATTTCTAAGAGATATAGACATTGGTGGTAAGAAAATTCATCAAGCTTCCAAAAACAAACTAAGGTTGACAAGATCAGGATCATTTCCTGTAACTGCACCTTCTAAGATGAAATACATTAGCTCTAGTACCTTCAGATACAAGCAAACTGAAATTTGGGCCTTTCCTAAAGGAGAAAAGTTGCTTGCTGGCACTCAGGCACCAAAAAAGTTGGGAACAAGTTTAGTGAAAGATGTTTCTTATGAAATTTCAAAGCCTTTGGTGAGTGATGATGCTGAAATGGATAGTGCCATGCAACAAAAACCAAACATTACTTCATTGCCTTCTGAAGGATTACCAAACCATAAAGGATGGAATCAAGTGGTTATTCATCAATTCAAAGTTATAAAACAGAAGATTAAACATGTACTTGTGGAGTTCAAGAAAAGTGGTCACCAAACATCCCTTGAAGCTATACAAAATAGTGAAAATATCACTAATAATGAGAAGGATATATCACAAAGCTTCAATGACGGCATGATTCGAGAATACAGAAAGAGTATAAGCATGAGTGAGACTAAAGCTTCTGATTCTGATTCTAATAAATATGATGTTCGGCTAATGCGAAGAACGTCCTCTCTTAACGAATCGTTGGATAAATATACTCAGTTGTTTGAAAAAAGTTTGAGCAAAGAGGTAAAGTGGAATAGCTCAAAGTCTAAAAGCTTAAGATTGACAAATGAGGAAAAGATTCACAAGAGAAGAGATGCTCGTATGTTTTCCAGAAGCAATTTTTCTATGCCGAATCTCGAGTCTTTAGGATTCATTCTACATGAAGCTCTTCTTGATACAAATGATATTGTAAATAATGCAATGGAAAGTGATAATGATGTTCAAAGTAAATCAGTGAGCATGCCTTTAAAGATTGATAAATCACTTGACCATTTTGAAAAGGCTGAAATTGATGAAACAGTTGAAAGGTGTGGTAGAGATGTGAATACTTATTCTTTATCTGATAAGATAGTTAAGAAAATTGATGAAGGAGTTACCTGTGACAAAAGGGAAGACATACATGAGCCAGAAGAGGGAGATGAAATTTCTCCTCAAGAAAAATTGGAAACTAGCTGTCAAGACAATACAACCAGCCAAGCAGAAGGAAAAGAATGGAATACAAGAGGATCAAATGCTACTAGTTTAACAGCCAAAAACAAAAACAAGAGTTTTGACAATCATTTGATGTTCTTCAATTCATATTCAGAAAACAATTCAAATTTCAAATACGTGAAAGATGTTCTTGAATTTTCTGGTTTCATGGAAAATGAGCATAATCAATTGCGATACACGGTAGACCAACCAATAAAACCATCCATATTCATGGCTATGGAAGAAACTTTCCTTCATGAAAATGAGTTTTCTGCAGAAGAGAGTATCAACCTTTGTGATCACCAGCTTCTTTTTAACTTGGTTAATGAGGTACTCTTTGAAATATATGAGAACTCACCAACTTATTTTCCAAGACCCTTTTCCTACAACTACAAGCTCAAACCAATGCCTAAGGGAAATTATCTTCTTAACCAAGTATGGAGTAGTGTTAGTTCATACATGAGCTTGAGACCAGAGTTGGATCAGACATTAGACGATGTTGTTTGTCGTGATTTGGCGAAAAGAAGTGGATGGATGAACCTTCAACATGAAGAGGAGTGTGTAACACTTGAAATTGAGGAAATGATCATAGAAGATATGTTAGATGAAATTATATTTTCAGATATGTTAGAAGATATGTAG 2175 0.349 MGKQLISSEESNVQIQETNVGCMWGMFHILDYHHWRVKKAFHHKKKRHARYKKKTTLQDQQNVVTVAEEPFSVSKHSKKLNATEEYSGTNQASSDYALQQKKDGKKTEGSLNREISIKLKNHDDVVEVISMKKNVLLKFLRDIDIGGKKIHQASKNKLRLTRSGSFPVTAPSKMKYISSSTFRYKQTEIWAFPKGEKLLAGTQAPKKLGTSLVKDVSYEISKPLVSDDAEMDSAMQQKPNITSLPSEGLPNHKGWNQVVIHQFKVIKQKIKHVLVEFKKSGHQTSLEAIQNSENITNNEKDISQSFNDGMIREYRKSISMSETKASDSDSNKYDVRLMRRTSSLNESLDKYTQLFEKSLSKEVKWNSSKSKSLRLTNEEKIHKRRDARMFSRSNFSMPNLESLGFILHEALLDTNDIVNNAMESDNDVQSKSVSMPLKIDKSLDHFEKAEIDETVERCGRDVNTYSLSDKIVKKIDEGVTCDKREDIHEPEEGDEISPQEKLETSCQDNTTSQAEGKEWNTRGSNATSLTAKNKNKSFDNHLMFFNSYSENNSNFKYVKDVLEFSGFMENEHNQLRYTVDQPIKPSIFMAMEETFLHENEFSAEESINLCDHQLLFNLVNEVLFEIYENSPTYFPRPFSYNYKLKPMPKGNYLLNQVWSSVSSYMSLRPELDQTLDDVVCRDLAKRSGWMNLQHEEECVTLEIEEMIIEDMLDEIIFSDMLEDM 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02580 724 PANTHER PROTEIN TRM32 100 718 IPR044257 -
Car01g02580 724 PANTHER PROTEIN TRM32 1 117 IPR044257 -
Car01g02580 724 Pfam Domain of unknown function (DUF4378) 555 714 IPR025486 -
Car01g02580 724 MobiDBLite consensus disorder prediction 483 501 - -
Car01g02580 724 PANTHER PROTEIN TRM32 100 718 - -
Car01g02580 724 PANTHER PROTEIN TRM32 1 117 - -
Car01g02580 724 MobiDBLite consensus disorder prediction 80 109 - -
Car01g02580 724 MobiDBLite consensus disorder prediction 83 98 - -
Car01g02580 724 MobiDBLite consensus disorder prediction 483 525 - -
Car01g02580 724 MobiDBLite consensus disorder prediction 502 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02580 Car-Chr1 51498866 51502574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02580 124 708 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.363 9.10e-45 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02580 - - cam:101509220 1415.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02580 01 51498866 51502574 Car01g02580 01 51498866 51502574 ECH