Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02549 ATGATGAATTGGAGAAAAAATGGTTTATTTATCTATGTTTTGTATATTTTATCATCTTCAATTTCTAGGGTTTGTTTTTGTGCTACTTTTGTTCCAACAGATAATTACCTTATAGATTGTGGATCATCCACAACTACTTCAATAGGTAACCGAAATTTCACTTCAGATAATTTATCTAAGAAATTTATCACCACACAACAAGAAATTCTTGCTAGCACTTCTTCAAAATCAGTTTCTTCTGATAATGTTGATGAAACCCCTCTTTATCAAACTGCAAGAATCTTCACTGGATCTTCAAAGTACACTTTTCCAATTAACCAAAAGGGTAGACACTGGATCCGGTTTTATTTCTTTCCATTTATATATGATAAGTACAATTTGAAGGCTGCAAAATTCTCTGTTTCAACACAAGCCTTTGTTCTTCTTAGTGGTTTCACTGCGGAGAAGAATCCTGTGATGAAGGAGTATTCAATCAATGTTACTTCAGATACACTCGTGATTGAGTTTAGACCTTATGAAAATTCTGTTGCATTTGTTAATGCAATTGAAGTTGTTTCTGTACCTGATGATCTTATTGCTGGTGATGCCTTTACCTTAAATCCAGCATCAACCTATTCAGGGTTGGTGTCACAAGCTTTGGAGACAGTTTGGAGGATTAACATGGGTGGTCCTGTTGTCTCTTCTGGACAAGACCCTCTTTATAGAACTTGGATTTCAGATCAAAAGTTTCTTCTAACATCGGACCTTGCTACCGATGTTTCGAAAATTGCTGGTGTTAATTATGCTAAAGGGGGTGCAACAGAAAACACTGCTCCACCTACTGTTTATGGTACTGCTACCGAGATGAACAAGAACTCGAGCAATGATATCAGCAATACTTTCAATGTGACATGGAGGTTTGATGTGGAGTCTGGATTTCAATACCTTGTTCGAGCTCACTTTTGTGATATAGTCAGCAAAGCTCTCAATGAACTTTACTTCAATGTTTATATTGACTCCTTCGCAGCTGCTAAGGATCTTGATCTTAGTACTACGGGTAATAATGTTTTGGCTGTTCCGTATTATAAGGATTTGGTTACATCCTTAGAGGACAACGATAAACTTAGTGTGAGTATTGGCCCTTCGGCCGTGAATAAGGACAATCCTAATGCTATTTTGAATGGACTAGAGATCATGAAAATGAACAATTCCATAGGTAGTCTTAGTGCTGCAGCAGCATCTGGTACTGGGGGTGATTCTTCTGGTTCGAGTTCTAGTAAGGTTGGCGTGATAGCAGGTGTGAGTGTAGGGATAGTGAGTGCATTGGTCTTGGCTGGTGTTTTCTGTGTAATGTGCAGGAAAAGAAGGAGGTTGGCAAGACAAAGACAATCGAAGACATGGATTCCTTTATCCGTCAACGATGCAGCTTCGCATACAATGGGAAGTAAATATTCGAACGGCACAACAATAAGTGCTGCTTCGAATTTTGAGTATCGCGTTCCTTTAGTGGAAGTTCAGGAGGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGGGTAGGTGGTTTTGGGAAAGTATTCAAGGGAGAATTAAGGGATGGCACGAAAGTGGCGGTGAAGAGAGGGAATCCACGGTCACAGCAGGGGATTGCGGAATTTCGAACGGAGATTGAAATGTTGTCTCAGTTCCGCCATCGCCATTTGGTGTCTTTGATTGGCTATTGTGATGAAAACAATGAAATGATCCTGATATATGAGTACATGGAGAACGGAACTCTCAAGAGTCATCTGTATGGTTCGGAATTCCCGAGCTTAAGTTGGAAGGAGAGACTCGAGATATGCATTGGATCTGCTAGAGGACTTCATTACCTTCACACCGGCTATGCTAAAGCTGTTATTCATCGTGACGTGAAGTCTGCAAATATACTACTCGATGAGAACCTAATGGCTAAAGTCGCTGATTTTGGATTGTCCAAAACTGGTCCTGAGCTCGACCAAACGCACGTGAGCACAGCCGTCAAAGGGAGTTTTGGGTACCTCGATCCCGAGTATTTCAGAAGGCAACAGCTGACAGAAAAGTCGGACGTGTATTCATTCGGGGTAGTTCTGTTTGAAGTTCTTTGCGCTAGGCCTGTCATCGATCCATCGCTTCCTAGGGAAATGGTAAACTTGGCAGAATGGGCAATGAAATACCAGAAAAAAGGACAGTTGGAACAAATCATAGATACAACACTTGCAGGGAAAATCAAACCAGATTCTCTAAGGAAGTTCGGAGAAACAGCGGAAAAATGCTTGGCTGATTACGGTGTCGACAGGCCTTCAATGGGAGACGTCCTGTGGAATTTGGAGTATGCTCTTCAACTTCAAGAAGTCGTTGTTCAAGGCGATCCTGAAGAAAACAGTACAAATATGATCGGCGAACTCTCTCCACAGGTCAACAACTTCAACCAGGAAACAAGTGTTTCTTCTGCTTCTGCGGTCCCATTCGAAGCTTCAACCGTCGATGATCTTTCCGGTGTTTCTATGAGTAGAGTATTCTCGCAGTTGGTGAAATCTGAGGGTAGATGA 2547 0.4126 MMNWRKNGLFIYVLYILSSSISRVCFCATFVPTDNYLIDCGSSTTTSIGNRNFTSDNLSKKFITTQQEILASTSSKSVSSDNVDETPLYQTARIFTGSSKYTFPINQKGRHWIRFYFFPFIYDKYNLKAAKFSVSTQAFVLLSGFTAEKNPVMKEYSINVTSDTLVIEFRPYENSVAFVNAIEVVSVPDDLIAGDAFTLNPASTYSGLVSQALETVWRINMGGPVVSSGQDPLYRTWISDQKFLLTSDLATDVSKIAGVNYAKGGATENTAPPTVYGTATEMNKNSSNDISNTFNVTWRFDVESGFQYLVRAHFCDIVSKALNELYFNVYIDSFAAAKDLDLSTTGNNVLAVPYYKDLVTSLEDNDKLSVSIGPSAVNKDNPNAILNGLEIMKMNNSIGSLSAAAASGTGGDSSGSSSSKVGVIAGVSVGIVSALVLAGVFCVMCRKRRRLARQRQSKTWIPLSVNDAASHTMGSKYSNGTTISAASNFEYRVPLVEVQEATNNFDESWVIGVGGFGKVFKGELRDGTKVAVKRGNPRSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTLKSHLYGSEFPSLSWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKYQKKGQLEQIIDTTLAGKIKPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEVVVQGDPEENSTNMIGELSPQVNNFNQETSVSSASAVPFEASTVDDLSGVSMSRVFSQLVKSEGR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02549 848 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Car01g02549 848 Gene3D Transferase(Phosphotransferase) domain 1 581 797 - -
Car01g02549 848 ProSiteProfiles Protein kinase domain profile. 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02549 848 SUPERFAMILY Protein kinase-like (PK-like) 481 776 IPR011009 -
Car01g02549 848 CDD STKc_IRAK 511 776 - -
Car01g02549 848 Pfam Protein tyrosine and serine/threonine kinase 510 717 IPR001245 GO:0004672|GO:0006468
Car01g02549 848 PANTHER OS07G0166700 PROTEIN 23 839 IPR045272 GO:0004714|GO:0006468
Car01g02549 848 Gene3D - 211 396 - -
Car01g02549 848 Gene3D - 35 188 - -
Car01g02549 848 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02549 848 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 23 839 - -
Car01g02549 848 Gene3D Phosphorylase Kinase; domain 1 466 580 - -
Car01g02549 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Car01g02549 848 Pfam Malectin-like domain 38 394 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02549 Car-Chr1 51207625 51211059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02549 8 848 Receptor kinase-like Gene Family AT3G46290 64.824 0.0 1081
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car01g02549 Malectin_like 3.9e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02549 - - gmx:100806488 1233.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02549 01 51207625 51211059 Car01g02549 01 51207625 51211059 ECH
Car06g03542 06 66583488 66587116 Car01g02549 01 51207625 51211059 ECH