Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02545 ATGTATGCAACAaattccaattccaattccaattccaaCAATATTCCATTTTCAACACCCTTTGTAATGCAACAAAACCACTCCATCCAAGATTTTACTGAGTTTGACTCGTTCCATGACACTATATCTCAACTCAACAACTCGGAATTGAGTAGTGGTTATAGTAGCTATGGTGGATCACCCTCACCAAGTACTCCAACCATCTTGATGCAGAGGAGCATTAGTAGCCATTCACTTCAAAACAATAATGGGACCCACCACCATCCCTTTTCTGCTTTTTTTGCTGAGTTGCTCGACTCTGAAGACACTCCGGTCAGGAAAGTTTGTAGTACTGGCGATTTGCAGAGGATGAACAGAATGCAACATAATCATCATGTGGATAGTCCATTGTCAAGCGAAAGTAGTATGATCATTGAAGGGATGAGCAGAGTTTGTCCATATAGCCCAGAAGAGAAGAAAGTCAGAATTGAGAGATACAGAAGAAAGAGGAATCAGAGGAATTTCAACAAGAAAATTAAGTATGTTTGCAGGAAGACATTGGCAGACAGGAGGCCACGGATCAGAGGACGGTTTGCGAGGAACGATGAAATTGATAAGAACCCTACAGTTCAGTGGAGCCACATCGGTGGTGGCGGGGAGGAAGAGGATGAGGAAGATGAGAATTGGATCAGTATGTTTGATTCCACAGTTGCTGCAAATCATGTTCATCATGAGTTTGAAGGCAATTCCTCCTTTGGTCTATTGTATTAG 750 0.4093 MYATNSNSNSNSNNIPFSTPFVMQQNHSIQDFTEFDSFHDTISQLNNSELSSGYSSYGGSPSPSTPTILMQRSISSHSLQNNNGTHHHPFSAFFAELLDSEDTPVRKVCSTGDLQRMNRMQHNHHVDSPLSSESSMIIEGMSRVCPYSPEEKKVRIERYRRKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARNDEIDKNPTVQWSHIGGGGEEEDEEDENWISMFDSTVAANHVHHEFEGNSSFGLLY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02545 249 Pfam CCT motif 154 194 IPR010402 GO:0005515
Car01g02545 249 ProSiteProfiles CCT domain profile. 152 194 IPR010402 GO:0005515
Car01g02545 249 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 249 IPR045281 GO:0009909
Car01g02545 249 PANTHER CCT MOTIF PROTEIN 6 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02545 Car-Chr1 51184233 51186163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02545 148 199 C2C2-CO-like Transcription Factor Family AT5G15850 46.154 7.53e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car01g02545 CCT 1.3e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02545 - - gmx:100820236 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02545 01 51184233 51186163 Car01g02545 01 51184233 51186163 ECH
Car01g02545 01 51184233 51186163 Car06g03540 06 66562648 66566043 PCT