Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02529 ATGCAGAGATCAGGTTATGGTTCGGATGGAATATACAGGTCTCTACGACCTTCCCTTACCCTACCCAAACACCCGAACCTCTCCCTCGTAACACACCTCTTCACCAAAGTCGCTTCGTCGTTAACCAAACCTGCTTTAATCGATGCCGACTCATTGCAAACCCTAACCTTCGCTCAGTTAAAATCCCTAACCATTAAACTCTCACACGCTCTTATCCACATCGGTGTAACAAAAAACGACGTCGTTCTCTTCCTCGCACCAAACAGTTACCTCTACCCCGTTTTCTTCCTCGCCGTTGCTTCAATCGGCGCCGTCGCTTCCACTGTCAACCCTGCCTACACCATCGCTGAAGTTTCCAAACAAGCCAATGACTCCAAACCTAAACTCATCATCACGGTCGCCGAATTATATTCCAAAGTCAAACACCTCAATCTCCCCGCCGTATTTCTCGATTCCACCGACATTCTTCAAAATTCAAATGTCACGAGTTATAAATCGTTGATCAAACTCGGTGACTCAGCCACCGAGTTTCCGAAAGTCGACGTTAAACAAACCGATACTGCCGCGCTTTTGTATTCCTCCGGAACAACGGGGATGAGCAAGGGCGTGATTCTCACGCACGGGAATTTCATTGCTTCGTCGTTGATGATTGGAATGGACGATGAATTAGCCGGAGATAAAGACGATGTGTTTCTCGTTGTTCTTCCGATGTTTCATGTGTTTGGACTTGCGGTTATAACGTATTCGCAGCTTCAGAGAGGTAACGCTGTTGTGTCGTTGAAGAAGTTTGAGTTTGAAGTGGTTTTGAAAACTGTTGAGAAGTATAGGGTAACGCGTTTATGGGTTGTGCCTCCTATTGTACTTGCTCTTGCTAAACATGCTTTGGTTGATAAGTATGATCTTTCTTCGTTGAAGTATATTGGTTCTGGTGCTGCTCCTCTTGGAAAAGAGTTGATGGAGGAGTGTGCTAAGCGTTTTCCTCATACAATCGTTGCTCAGGGCTATGGTATGACTGAAACTTCTGCTCAAATTGTCAGTGTGGATACACTGAAGCCACTTCCTCCTGGACAGCTTGGGGAGATATGGGTTCGCGGTCCTAATATGATGCAAGGTTATCACAACAATCCACAAGCCACAAGTTTAACTATAGATAAAAGTGGTTGGGTACATACAGGAGATCTTGGATATTTTGATGAAGATGGACATCTTTTTGTTGTTGACCGTATCAAAGAACTGATCAAGTATAAAGGTTTTCAGGTTGCACCAGCAGAACTTGAAGGGCTTCTTGTTTCTCATCCTGAAATACTTGATGCTGTTGTCATTCCATATCCTGATGCCGAAGCTGGTGAGGTTCCGGTTGCCTATGTTGTGCGATCACCCAATAGTTCACTAACCGAGAAAGATGTTCAAAAGTTTATTGCTGATCAGGTAGCACCTTTCAAAAGATTGCGAAAGGTAACGTTCATCAGCACTGTTCCGAAAACAGCATCAGGAAAAATTCTAAGAAGAGAGCTTATTGACAAAGTACGATCCAAAATATAA 1542 0.441 MQRSGYGSDGIYRSLRPSLTLPKHPNLSLVTHLFTKVASSLTKPALIDADSLQTLTFAQLKSLTIKLSHALIHIGVTKNDVVLFLAPNSYLYPVFFLAVASIGAVASTVNPAYTIAEVSKQANDSKPKLIITVAELYSKVKHLNLPAVFLDSTDILQNSNVTSYKSLIKLGDSATEFPKVDVKQTDTAALLYSSGTTGMSKGVILTHGNFIASSLMIGMDDELAGDKDDVFLVVLPMFHVFGLAVITYSQLQRGNAVVSLKKFEFEVVLKTVEKYRVTRLWVVPPIVLALAKHALVDKYDLSSLKYIGSGAAPLGKELMEECAKRFPHTIVAQGYGMTETSAQIVSVDTLKPLPPGQLGEIWVRGPNMMQGYHNNPQATSLTIDKSGWVHTGDLGYFDEDGHLFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEKDVQKFIADQVAPFKRLRKVTFISTVPKTASGKILRRELIDKVRSKI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02529 513 Pfam AMP-binding enzyme C-terminal domain 424 499 IPR025110 -
Car01g02529 513 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 341 - -
Car01g02529 513 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 341 512 - -
Car01g02529 513 CDD 4CL 21 505 - -
Car01g02529 513 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 341 - -
Car01g02529 513 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 341 512 - -
Car01g02529 513 SUPERFAMILY Acetyl-CoA synthetase-like 25 511 - -
Car01g02529 513 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Car01g02529 513 Gene3D - 9 410 IPR042099 -
Car01g02529 513 Pfam AMP-binding enzyme 38 344 IPR000873 -
Car01g02529 513 Gene3D - 411 512 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02529 Car-Chr1 51047506 51052474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02529 1 513 Monolignol Biosynthesis Gene Families AT4G05160 63.419 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02529 K01904 - gmx:100797843 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02529 01 51047506 51052474 Car01g02529 01 51047506 51052474 ECH