Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02518 ATGTGCAAAACAAAAATGGCCATTAACGCCACAAACCCAAACTCAACTCCACGCACCACCCAAACACCCACAAGAAcaacatcatcatcgtcatcatcGAAACCCACACGTGCAATCTCCCTCTCCAACAAAACCAAAACCCCTTCATTATCTGACAACCCTTCCACCTCCTACGCCACCACCACCGGCTCTACCGGTTTCCAACTCTCCACCGACACTTCTACCTCAAGTCCCACATCACTCACCTCTCTCCGCGGCACCCTCCCAGATAACCCGAACATCTACGATTTCTCCGAAATCCGTTCCGCCACTAACAACTTCCTCTCCAAACGCTACTCTTCCTCAACCCCTTGCTGGCGTTGCACCCTACGCAACGCTGACGTCATCGTTTTCCAACGCAAATCCCGAACCAAACTCCAAACCTCTCAGCTTCGTGAACTTCTCTCCGTCGTTTGCCGTAGCCACCACGTCAGCTTCATCAAACTCCTTGGCATTTCAATCTCCGGCGAATATATATACCTCGTTTACGAATTCGTCAACGGAGCTAACCTCTCCGATTGTTTACGAAACTCTAGGAACGTTCACTTCACCGTTCTTTCTACGTGGATTTCGAGAATGCAAGTTGCTACCGATCTCGCTCACGGACTCGATTACATTCATAATAAAACCGGTTTGAATATCAATTTCGTTCACAATCATATTAAGAGTAGCGCTATTATTGTTACGGAACCTGATTTCAACGCTAGGGTTTGCCATTTCGGCGCGGCGCAGCTTTGCGGTGAAGCCGTTGAAGAAAACGAAATTGATACAAAAAAAGTGGGGGAAATCACGGAGGAACCTAGATCCAAGGAATTGAGAAGCTCTATTGTGCAATTCGAAGGTGTACGGGGGTATATGTCGCCGGAATTTCAGGCTACCGGCGTGGCGACGCAGAAGTCCGATGTGTATGCCTTTGGAGTGGTGATTTTGGAGCTTTTGACCGGAGAGGAACCGTTGAAGTTTAAATTCGACGAGAAGAGCCGTGATTTTGTGAGGATTTCGGTTATTGCGACGGCGAGAGCGGTCGTGGAAGGCGGAGATGGTGGCGTGGAAGGGAAGCTAAGGAGGTGGGTGGATAGGAGATTGAAAGATTCGTTTCCCGTTGATGTTGCAGAAAAGTTGACACGTGTAGCATTGGATTGCGTACACGTGGATCCAGATATGAGGCCTAACATGGGGCGCGTTGCGGGGAAAATCTCCACGCTTTATTTGCAGTCAAAGAAATGGTCTGATAACATGAAATTGCCTGATATGTCCTTTTCACTGGCTCCTCGTTGA 1317 0.4784 MCKTKMAINATNPNSTPRTTQTPTRTTSSSSSSKPTRAISLSNKTKTPSLSDNPSTSYATTTGSTGFQLSTDTSTSSPTSLTSLRGTLPDNPNIYDFSEIRSATNNFLSKRYSSSTPCWRCTLRNADVIVFQRKSRTKLQTSQLRELLSVVCRSHHVSFIKLLGISISGEYIYLVYEFVNGANLSDCLRNSRNVHFTVLSTWISRMQVATDLAHGLDYIHNKTGLNINFVHNHIKSSAIIVTEPDFNARVCHFGAAQLCGEAVEENEIDTKKVGEITEEPRSKELRSSIVQFEGVRGYMSPEFQATGVATQKSDVYAFGVVILELLTGEEPLKFKFDEKSRDFVRISVIATARAVVEGGDGGVEGKLRRWVDRRLKDSFPVDVAEKLTRVALDCVHVDPDMRPNMGRVAGKISTLYLQSKKWSDNMKLPDMSFSLAPR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02518 438 Pfam Protein kinase domain 134 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02518 438 PANTHER OS09G0572100 PROTEIN 1 438 - -
Car01g02518 438 ProSiteProfiles Protein kinase domain profile. 56 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02518 438 Gene3D Transferase(Phosphotransferase) domain 1 180 431 - -
Car01g02518 438 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 438 - -
Car01g02518 438 SUPERFAMILY Protein kinase-like (PK-like) 119 408 IPR011009 -
Car01g02518 438 MobiDBLite consensus disorder prediction 1 87 - -
Car01g02518 438 Gene3D Phosphorylase Kinase; domain 1 70 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02518 Car-Chr1 50905920 50907757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02518 90 422 Receptor kinase-like Gene Family AT1G51940 31.454 3.11e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car01g02518 Pkinase 4.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02518 - - gmx:100792694 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02518 01 50905920 50907757 Car01g02518 01 50905920 50907757 ECH