Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02512 ATGAAGCATCAACTCAAAGTTTCTGTTGCTCTTGTTATTAGCTTGCTATGCTTTCAGCACTCATTTTGTGGAAATGAACCTTCTGATACTGTTCTAAACAGGTGGAAATGTAGATGTGCTTTTAGAGGGAACCAGAGATACTCTATTGCTAATTGTTCCAAGTCATGTGATTGCCATTCAGATGCTGAAGAGAATGCATCCATATGGACATGCATATGTAATCCAAATGGTTTTCCTGAAGTGGCTGCAGGTAGCCATAATCCTAATTGCTTTATTGCCTGCAACTGCATTTGGGGAACGGTTAGGATGGTGCGAGGTTCAAAAACACACATTTCGAGCAAGATTGTAATAATCATTTTAATAATGTGTGTTACATGCACAACTATTGCATTTCTCACCTCAATTGTATGCTATGTCCGCCGAAGGGAGAGGCATCATCCTATTCAATCACCAATGATCTCATCATTGGATAAGGAAACGAATTGTAGTATTACCACCAACTTCATTAGTCACAGGACTTCTTCAGTTCCAGGAATAAAAGGCATTATGAATTCTCCTATTAGTCATATTACAAGATGCTTTCAAAAAGCCTCAATCTTGTTTGGGAATCAAAGAGAAACATTTCATGGAAATATTATTCAATTTTCATTTTCTGAATTGGAACATGCCACCGAAAACTTTTCAGCTTCCAACCTTATTGGACTAGGTGGAAGTAGTTATGTATACCGTGGTCGAATGAAAGACGGTAGTAATGTGGCTGTCAAGCGAATTAAAGATCAAGGAGGACCTGAAGCAGATATTGAATTTTTCACAGAGATTGAACTATTGTCTAGACTTCATCATTGTCATCTTGTGCCATTGATTGGATACTGCTCAGAATTAAAAGGAAAAATTGTTCAGAGGTTACTTGTGTTCGACTACATGAGTAACGGAAATTTGAGGGATCTTTTAGATGGAGTTTTCGGAAAAAGTATTGATTGGTCTACTCGTGTTACAATTGCGTTAGGAGCTGCAAGGGGATTAGAGTATCTTCATGAAGCAGCTGCTCCAAGAATTCTCCACCGAGATGTCAAATCGACAAACATTCTTCTCGATAAAAATTGGCAAGCAAGAATAACTGATCTTGGTATGGCTAAAGACCTGAGGTCTGATGACCTTCCCAGTTGTTCAGATTCTCCAGAAAGAATGAAGGGGACATTTGGCTATTTTGCACCTGAGTATGCAATTGTTGGAAGAGCCTCTATTGAATCTGATGTCTTCAGCTTTGGTGTGGTTCTTCTTGAGCTTATCAGCGGTCGCCAACCGATCCATAAATCTGCAGGCAAAGAAGAAAGCCTTGTTGTTTGGGCTGCTCCTCGCATACAAGATAGTCAGCGAGTAATAACAGAGTTGGTTGATCCACAATTGAAAGGAAACTTCCCAAAAGACGAGGTACATATAATGGCAAACCTTGCAAAAGAGTGCTTACTGTTGGATCCTGATACTAGACCAACTATGAGTGAAGTTGTTCTAATTCTTTCAAGTATTTCTCCAACCAAATCTAGAAGGAGAAGATACATTCAATTGTGCCTTTTTCAGGAATCAGAGGAAATAGAGAAGCAAACACAAGCTCCATGGAGTAGATTTCCACCTCATAATTCATTGCCACTTGGTACCGACTACAATCATTGTGTTGGAAACAAAGATAAAGATGTAGATACAATTTCGACCGAGTATATGAAGAGTTTGATCTTCATGACTTCAAAAGGTGAGAACCGGCATGCATCAGAAGAGGAAATGGTAGACCTAACCGAGCCTCGGTTGGAATCATTTTGCATTACAAACATCAATTTCCCTTGA 1839 0.3926 MKHQLKVSVALVISLLCFQHSFCGNEPSDTVLNRWKCRCAFRGNQRYSIANCSKSCDCHSDAEENASIWTCICNPNGFPEVAAGSHNPNCFIACNCIWGTVRMVRGSKTHISSKIVIIILIMCVTCTTIAFLTSIVCYVRRRERHHPIQSPMISSLDKETNCSITTNFISHRTSSVPGIKGIMNSPISHITRCFQKASILFGNQRETFHGNIIQFSFSELEHATENFSASNLIGLGGSSYVYRGRMKDGSNVAVKRIKDQGGPEADIEFFTEIELLSRLHHCHLVPLIGYCSELKGKIVQRLLVFDYMSNGNLRDLLDGVFGKSIDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQARITDLGMAKDLRSDDLPSCSDSPERMKGTFGYFAPEYAIVGRASIESDVFSFGVVLLELISGRQPIHKSAGKEESLVVWAAPRIQDSQRVITELVDPQLKGNFPKDEVHIMANLAKECLLLDPDTRPTMSEVVLILSSISPTKSRRRRYIQLCLFQESEEIEKQTQAPWSRFPPHNSLPLGTDYNHCVGNKDKDVDTISTEYMKSLIFMTSKGENRHASEEEMVDLTEPRLESFCITNINFP 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02512 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Car01g02512 612 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Car01g02512 612 SUPERFAMILY Protein kinase-like (PK-like) 208 506 IPR011009 -
Car01g02512 612 SMART serkin_6 227 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02512 612 Gene3D Phosphorylase Kinase; domain 1 198 307 - -
Car01g02512 612 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 606 - -
Car01g02512 612 Gene3D Transferase(Phosphotransferase) domain 1 308 527 - -
Car01g02512 612 Pfam Protein kinase domain 229 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02512 612 CDD STKc_IRAK 233 509 - -
Car01g02512 612 ProSiteProfiles Protein kinase domain profile. 227 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02512 612 PANTHER OS01G0253100 PROTEIN 2 606 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02512 Car-Chr1 50841035 50844442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02512 1 609 Receptor kinase-like Gene Family AT2G28250 48.287 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Car01g02512 Pkinase 8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02512 - - gmx:100499641 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02512 01 50841035 50844442 Car01g02512 01 50841035 50844442 ECH
Car01g02512 01 50841035 50844442 Car06g03458 06 64982331 64988316 PCT