Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02511 ATGGGATTTGATAATCCAAGATCTGAGAGGTTTGAATTTGAAGATGATTCTGATATATCAAAAATTCCAACAACAAATGGTGTTAAGGTGAAATACCACATTGATGGAACACAAATACCTGAACCAAGTTCCAAAAAGTCTCAAAAGAAGGTTACAATTACAGGGAAGAAATTTTTGAAAACTAGAGTATTATCAAGAGTATTCTCAGAAGACTATGAAAGAGTAAAAAGAAGAGTATTAGATCCTAGGGGACAAATCATTCATCGttggaacaagatatttttgatagcatgtttagtgtctttgtttgtggatcctctgtttttttatttgccagtagttagagatgaagtgtgtattgatattggaaatactcttgaagttattcttacaattgttagatcaattggggatttgttttatatggttcagatttttatcaagtttcgtacagcttatgttgctccttcttccaaaatatttgggagaggagaacttgttgttggatatcctaagattgcttttaggtactttcgcaagggatttttgttggacttcattgctgcattgcctcttcctcagGTGTTGATTTGGATTATTATACCAACACTAAGGGGTTCAACCATGGCAAACACAAAAAACGTCCTTCGTTTTTTCATCATTTTCCAATATATTCCAAGGCTGTTTTTGATTTTTCCACTTTCATCACAAATTGTAAAAGCTACAGGAGTTGTCACAGAAACAGCATGGGCAGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCCAGCCATATTTTAGGAGCTTGCTGGTACCTTCTATCAATTGAACGTCAAGAAGCATGTTGGAGAAATGTTTGCAAAATGGAAAAATCATATTGTGAATATGGATTCTTTGATTGCCACAGGATTAAAGAAGCCCTCAGGGTCACCTGGTTTTTAACTAGTAATGTCACAAATTTATGTTCACCAAATGCTGACTTTTATCCCTTTGGTATATATGCTGATGCCATGACTTCACAAGTTACATCCTCTCCATTCTTCAATAAGTACTTCTTTTGTCTCTGGTGGGGCTTAAGGAATCTAAGTTCTTTGGGACAAGGCCTTCTTACTAGCACTTTTGTTGGAGAAATAATGGTTGCCATTATTGTTGCAACTCTTGGATTGGTTCTTTTCGCATTGCTGATTGGTAATATGCAGACATACCTCCAATCGATAACAGTTCGCCTCGAAGAGTGGAGAGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAGCTACCTTCGGAATTAAGAGAGTCTATTCGTAAATATAATCAATATAAATGGGTGGCTACACGGGGAGTAGACGAAGAAGATCTTCTCAAAGGACTTCCAATTGATCTTAGGAGAGACATCAAACGCCACCTTTGTCTTGAACTAGTTCGAGGAGTTCCATTGTTTGATCAAATGGATGAGAGGATGCTAGACGCAATATGCGAAAGACTAAAGCCTGCATTGTGCACTGAGGGAACTTATCTTGTTCGCGAAGGTGATCCAGTGAACGAGATGCTATTTATAATTCGAGGCAACCTTGATTCTTACACCACAAACGGAGGCCGAGACGGATTCTTCAACTCATGTCGAATCGGACCAGGTGATTTCTGTGGTGAAGAACTGTTAACATGGGCCTTAGATCCAAGACCAAGTGTAATACTCCCTTCTTCAACAAGAACAGTTAAAGCTATCTCAGAAGTTGAAGCCTTTGCACTCATAGCTGAAGACCTTAAGTTTGTTGCATCTCAATTTAGAAGACTGCATAGTAAACAACTTAGGCATAAATTCAGATTTTACTCACACCAATGGAGAACTTGGGCTGCTTGTTTTATTCAAGCTGCATGGAGAAGACACAAGAAAAGGAAGGAAGCTGCTGAACTAAGGGCTAAGGAGAATCTTGTGGCTGCTTCAGAGGCTGAAATATCTACAAAACATGGGTCAGGTTTTGTTGTGTATGGAACAAGGGTGGCAAGGAGTACAAGAAAAAGTGTTCATATGCATTCTGGGACAAATTCTGGGGTGGTAAGCTCTTTGCAGAAGCCAACAGAACCAGATTTTTCTGTTGAATAA 2112 0.3348 MGFDNPRSERFEFEDDSDISKIPTTNGVKVKYHIDGTQIPEPSSKKSQKKVTITGKKFLKTRVLSRVFSEDYERVKRRVLDPRGQIIHRWNKIFLIACLVSLFVDPLFFYLPVVRDEVCIDIGNTLEVILTIVRSIGDLFYMVQIFIKFRTAYVAPSSKIFGRGELVVGYPKIAFRYFRKGFLLDFIAALPLPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYIPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWRNVCKMEKSYCEYGFFDCHRIKEALRVTWFLTSNVTNLCSPNADFYPFGIYADAMTSQVTSSPFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMVAIIVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKRTDTEQWMHHRQLPSELRESIRKYNQYKWVATRGVDEEDLLKGLPIDLRRDIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGNLDSYTTNGGRDGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEAAELRAKENLVAASEAEISTKHGSGFVVYGTRVARSTRKSVHMHSGTNSGVVSSLQKPTEPDFSVE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02511 703 MobiDBLite consensus disorder prediction 675 703 - -
Car01g02511 703 PRINTS EAG/ELK/ERG potassium channel family signature 145 154 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car01g02511 703 PRINTS EAG/ELK/ERG potassium channel family signature 262 272 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car01g02511 703 PRINTS EAG/ELK/ERG potassium channel family signature 351 368 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car01g02511 703 PRINTS EAG/ELK/ERG potassium channel family signature 395 404 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car01g02511 703 PRINTS EAG/ELK/ERG potassium channel family signature 445 452 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car01g02511 703 ProSiteProfiles cAMP/cGMP binding motif profile. 482 579 IPR000595 -
Car01g02511 703 SUPERFAMILY cAMP-binding domain-like 412 608 IPR018490 -
Car01g02511 703 Pfam Cyclic nucleotide-binding domain 505 592 IPR000595 -
Car01g02511 703 SUPERFAMILY Voltage-gated potassium channels 81 404 - -
Car01g02511 703 ProSiteProfiles IQ motif profile. 618 646 IPR000048 GO:0005515
Car01g02511 703 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 15 702 - -
Car01g02511 703 Gene3D - 92 408 - -
Car01g02511 703 Gene3D Jelly Rolls 480 600 IPR014710 -
Car01g02511 703 SMART cnmp_10 482 613 IPR000595 -
Car01g02511 703 PANTHER - 15 702 - -
Car01g02511 703 Pfam Ion transport protein 90 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car01g02511 703 Gene3D Helix hairpin bin 410 473 - -
Car01g02511 703 MobiDBLite consensus disorder prediction 677 703 - -
Car01g02511 703 CDD CAP_ED 482 613 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02511 Car-Chr1 50829422 50834591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02511 53 703 Ion Channels AT2G28260 74.194 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02511 K05391 - gmx:100786868 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02511 01 50829422 50834591 Car01g02511 01 50829422 50834591 ECH