Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02490 ATGGTTGATTATAGGAGTTTTTCATTTACTAGAATGATTGGCTGCTGGAGTTGCTTCGGGTTGATAAAAAAACCGAGGCGTCAACGTACTAAGCGCGGCATCAACAATTTTCTCTCCCAAGGGCTATTGACGGATGGAGAAACTGAAGGGGATGAAGTTTCGTATAGTGGTGACTATACTAGTAACACCACCAGTGGAGATGATAGTGAGGTGCAAAATTTACCCAATCGTTCAGAGGATATTTTGAATTTTAGAGCAGAGAATGGCATGATTTGTAGGCCTTTTCCTGTTAAAGAGACTGTCAAGCTTGTTCGTTCGGAGGATGACAATGGGAACAAGATGTTAAATGAGTATATTCGAGAGTATAAGATTGGTTCTGGAAGCTATGGCAAAGTGGCTCTTTATGAAAGTAGTGTTGATGGACATCATTATGCAATTAAGTCCTTTCATAAGTCTCACTTACGGAAACTTCGAGTTGCTCCATCTGAGACTGCCATGACTGATGTTCTACGTGAGGTACTTATCATGAAAATGCTGGAACATCCTAATATAGTTAATCTCATCGAGGTGATTGATGACCCAGAGTCAGATGACTTCTACATGGTACTTGAATATGTGGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCGTCAATGTGCCTTAGGTGAAGAGACTGCTAGGAAATACATGCGTGATATAGTCTCGGGATTAACATATCTTCATGCTCATAATATAGTTCATGGGGATATAAAACCTGATAATTTGTTGATTACTCGCAATGGGACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGACGGTAGTGATGAACTTCGTCGATCACCTGGCACTCCTGTTTTCACGGCACCAGAATGTTGTTTAGGCCTTACTTATCACGGTAAAGCTTCTGACACGTGGGCAGTAGGAGTTACTTTGTACTGTATGATATTGGGTGAATACCCATTTCTCGGAGACACACTTCAAGATACATACGACAGAATAGTCAATAATACTTTAGAACTCCCAGATGACATAAACCCGCAGTTAAAGAACTTAATAGAAGGATTGCTTTGCAAAGACCCAAGTCTAAGGATGACTTTGGCTGATGTTGCTGAGCATGCTTGGGTTATTGGAAATGATGGGCCAATTGGTGAGTACTCGTGTTGGTGTAAACGCAAGAGCCTGGTGAGCGAAGACTTTGAGGAGAGCGATGTGCTTGTTTGA 1233 0.4185 MVDYRSFSFTRMIGCWSCFGLIKKPRRQRTKRGINNFLSQGLLTDGETEGDEVSYSGDYTSNTTSGDDSEVQNLPNRSEDILNFRAENGMICRPFPVKETVKLVRSEDDNGNKMLNEYIREYKIGSGSYGKVALYESSVDGHHYAIKSFHKSHLRKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDDFYMVLEYVEGKWVCEGSGRQCALGEETARKYMRDIVSGLTYLHAHNIVHGDIKPDNLLITRNGTVKIGDFSVSQAFEDGSDELRRSPGTPVFTAPECCLGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNTLELPDDINPQLKNLIEGLLCKDPSLRMTLADVAEHAWVIGNDGPIGEYSCWCKRKSLVSEDFEESDVLV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02490 410 ProSiteProfiles Protein kinase domain profile. 118 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02490 410 MobiDBLite consensus disorder prediction 54 71 - -
Car01g02490 410 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Car01g02490 410 SMART serkin_6 118 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02490 410 Gene3D Phosphorylase Kinase; domain 1 112 215 - -
Car01g02490 410 Gene3D Transferase(Phosphotransferase) domain 1 216 386 - -
Car01g02490 410 SUPERFAMILY Protein kinase-like (PK-like) 109 388 IPR011009 -
Car01g02490 410 MobiDBLite consensus disorder prediction 47 71 - -
Car01g02490 410 CDD STKc_LKB1_CaMKK 124 379 - -
Car01g02490 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Car01g02490 410 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 7 407 - -
Car01g02490 410 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 7 407 - -
Car01g02490 410 Pfam Protein kinase domain 120 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02490 Car-Chr1 50604393 50608682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02490 124 386 CBL-interacting serine-threonine protein kinases AT5G35410 33.460 4.83e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Car01g02490 Pkinase 8.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02490 K00908 - gmx:100776013 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02490 01 50604393 50608682 Car01g02490 01 50604393 50608682 ECH