Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02484 ATGGAAGGAAAACAAAAGGGTTCCAGTTACACTTTTCCACCTGGTTTTAGATTTCACCCTTCTGATGAGGAACTCATAGTTCATTACTTGCAAAAAAAAATCAAATCACTTCCACTTCCAGCTTCTATTATAGCTGAAATTGATCTATATAAGTATAATCCATGGGAGCTACCAAAGAAGTCTTTGTTTGGGGAGGAAGAATGGTATTTCTTTAGCCCGAGAGATCGAAAGTACCCAAATGGATTAAGGCCAAACAGAGCAACAGGTTCAGGATACTGGAAGGCAACAGGAACTGATAGGCCAATTATTTCTTCATGTGGATCAAAGCATATAGGAGTGAAGAAAGCTCTTGTGTTTTATTCAGGTAGACCTCCTAAGGGAGCTAAGACAGATTGGATCATGAATGAATATAGGTTGATTGACACAACAACAAAAtctttcatgctaaaaggttccatgcgaTTGGATGAGTGGGTATTGTGCCGAGTTCGACATAAAGGCTATTCATCAAAGAATTTATCTGAAAATCAAGAAAATCCTTGTGAACCAAATATACCAGTAAACCTACAGACGAGTGAAGAACATCCGACAAACACGAAGTTTCGAGCTGACATGATCACAGATTATCAATACAAAGACTATCAGATCATAGCCTCGATTCTTGTTGGTGGAGTTATACCTCCAAATGAGAACATGTCAAGTTTGAGCTTTAAGGGAAGCAAAGGCAACAACCTAACTTCAGAGTATGAAGAAGGTTCCAATAAAGTGAATTCTCAAACTGCAATCCCTTCTTTGGAATGTTACTTCAACCCACTGAAAAGAAAATCTAATGAGGATGATGATCAGTTTGAGAATCTCATTTCTTTTACAAGCAAGTTCAACACTGAGAACAAAATAGACAAATCTTTTAACAAGGTCTTGACCAATAGAGAATTGAACTGCTATGAGATTTTCAATGGGAGCACACCAAATCCTAGCATCGATTTTCAAGAACTAAATGAATTAAACTTTGCAGAATGA 1020 0.3627 MEGKQKGSSYTFPPGFRFHPSDEELIVHYLQKKIKSLPLPASIIAEIDLYKYNPWELPKKSLFGEEEWYFFSPRDRKYPNGLRPNRATGSGYWKATGTDRPIISSCGSKHIGVKKALVFYSGRPPKGAKTDWIMNEYRLIDTTTKSFMLKGSMRLDEWVLCRVRHKGYSSKNLSENQENPCEPNIPVNLQTSEEHPTNTKFRADMITDYQYKDYQIIASILVGGVIPPNENMSSLSFKGSKGNNLTSEYEEGSNKVNSQTAIPSLECYFNPLKRKSNEDDDQFENLISFTSKFNTENKIDKSFNKVLTNRELNCYEIFNGSTPNPSIDFQELNELNFAE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02484 339 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Car01g02484 339 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
Car01g02484 339 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Car01g02484 339 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Car01g02484 339 PANTHER NAC TRANSCRIPTION FACTOR 56 1 318 - -
Car01g02484 339 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02484 Car-Chr1 50578802 50580789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02484 12 171 NAC Transcription Factor Family AT1G61110 66.860 1.02e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car01g02484 NAM 2.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02484 - - gmx:100817193 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02484 01 50578802 50580789 Car01g02484 01 50578802 50580789 ECH