Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02461 ATGGAGGAGACACGAGAAGATGCAGGGACGACAGAGCAAGGGCCATCTAATGTTAACGTATCATGGTGGCCTTCAGATTTTGTTGAAAAATTTGGATCTGTTGCTTTGGATTCTCAAGACGAGACAGTAAATAATAAAGGATCTCTTAGACTCTCTGATGAAGATGTTTTGTCACCTCTGAAAGCATCACAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGCTTTTATTCAGTTATTCCGGAGACAAGACTCAAGGAACTTTTTGATAGTATTCCTACCTTGGACGAGCTTCATGCTTTGGGTGGAGAGGGTTATAAGGCTGATATCATTCTCGTGGATTCAGTGAAAGATAAAAAACTATCCATGTTGAAGCAACTGCTTGTGACATTAGTTAAAGGGTTAAACTCAAATCCAGCTGCAATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGATCCAGTGTGGAAAGTCCAGCAAAAGCTGCACTCGATGAAACCTCTCACATGTTTGAGAATCGAGGTGTCCAGATGCTGGGGCAAATAAAGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTAGGTCTTGAAAGCAGGCTCATGGTGGGCTTGCCAAATGATGGGGCTGTTGAATGTGTAGATTCATACAAGCATATGTCTGTGATAGTTGTATTAAATTCGGTGGAAATGCTGGTTGATCTTATGCGATTTCCGGGTCAATTGTTACCAAAATCAACCAAAGCAGTTTTCATGAGTCATATATCCGCAGCAGGAGAGAGCGATTCAGCAGAAAATGATTCTTGTGATTCGCCGTTAGAACCAAACAGTCCTTTATTTGGTGTTTCAGAGAGTGCTGAGAAGGAGGAAAACCTTCAATTCCATAGAAGATTTGAAGTATCTTCAAATGTAACAGGACTTTCCCTAAGAAATATGATGTTACGATCAAATAGCAGTTTGAGTCCAGAACATCCATCATTTCGAGCACGTGCACGGTCCATGCTTAGTGGTGATAGGACAGACTTTAGAGATTTTGCTGATGACCAGGCTACATCAAGATCCAGCTGTAGATCAGATGGTGCATCATCATCAGCAGCTCGTAGGATACGACGAAGAAGCATCAGCATTACGCCAGAAATCGGGGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAAAATCGTCTTATGAGAGAACGAGGGGATGATAACTCATTCTCCCATTCTCCGAACAATAGTAGTGATGCAAATCTTCAGAAAAATGTGTCGAATTTCCATCTAGATGGTCATGATGAAAGGTCCACCTTATATTCTTTTCAGCGTGACCAATTAACATCACAAAAGGCAATGTCGTTACCATCTTCACCACATGACTATAGAAGTCAAGCTTCTGAGAGAAGCGAACTATCAAGATATGGAGTGAATGATGAAATGGAGTCGACCTGGAATAAAGTACTTGAATCTCTAATGTTCAATAACAAACCTTTATTGCCATATGAAGCATGGAATATTGACTTCTCAGAATTAACTGTTGGAACTCGTGTTGGAATAGGCTTCTTTGGAGAAGTATTCCGTGGTATATGGAATGGCACTGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAAATATCTATTCTGAGCCGACTCCGACATCCTAATGTCATCTTATTTCTTGGTGCATGCACAAAGCCTCCTCGTTTATCTATGGTTACGGAATATATGGAGATGGGATCATTGTATTACTTGATACATTTGAGTGGTCAGAAGAAAAAGCTCAGTTGGCGGAGAAGACTTAAGATGTTGCGTGACATCTGCAAGGGTTTGATGTGCATACACCGTATGAAGATTGTTCACCGTGATTTGAAAAGTGCAAATTGTCTAGTGAACAAGCATTGGACCGTGAAAATCTGTGATTTTGGGCTTTCAAGAATAATGATAGAATCTCCAATCAAAGATTCTTCGTCGGCCGGAACTCCAGAATGGATGGCTCCTGAACTCATCCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAGCTGTGCACCTTGAACAGACCGTGGGAAGGCGTACCACCTGAGAGGGTGGTTTATTCTGTTGCTAATGAGGGTTCCAGATTAGAGATTCCTGAAGGCCCACTAGGCAGGCTGATTTCAGACTGTTGGGCAGAATCACACGAGCGGCCAAATTGTGATGAGATTCTCTCTCGTTTGGTGGACATGGAGTACTCTATTTGTTGA 2349 0.4142 MEETREDAGTTEQGPSNVNVSWWPSDFVEKFGSVALDSQDETVNNKGSLRLSDEDVLSPLKASQILWRTGMLSEPIPNGFYSVIPETRLKELFDSIPTLDELHALGGEGYKADIILVDSVKDKKLSMLKQLLVTLVKGLNSNPAAIIKKIAGLVSDFYKRSSVESPAKAALDETSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDGAVECVDSYKHMSVIVVLNSVEMLVDLMRFPGQLLPKSTKAVFMSHISAAGESDSAENDSCDSPLEPNSPLFGVSESAEKEENLQFHRRFEVSSNVTGLSLRNMMLRSNSSLSPEHPSFRARARSMLSGDRTDFRDFADDQATSRSSCRSDGASSSAARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLMRERGDDNSFSHSPNNSSDANLQKNVSNFHLDGHDERSTLYSFQRDQLTSQKAMSLPSSPHDYRSQASERSELSRYGVNDEMESTWNKVLESLMFNNKPLLPYEAWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLKMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMIESPIKDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISDCWAESHERPNCDEILSRLVDMEYSIC 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02461 782 MobiDBLite consensus disorder prediction 274 294 - -
Car01g02461 782 ProSitePatterns Protein kinases ATP-binding region signature. 532 553 IPR017441 GO:0005524
Car01g02461 782 MobiDBLite consensus disorder prediction 409 436 - -
Car01g02461 782 SMART serkin_6 526 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02461 782 Gene3D Phosphorylase Kinase; domain 1 519 604 - -
Car01g02461 782 MobiDBLite consensus disorder prediction 358 383 - -
Car01g02461 782 Pfam Ethylene-responsive protein kinase Le-CTR1 62 255 - -
Car01g02461 782 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 334 780 - -
Car01g02461 782 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 29 333 - -
Car01g02461 782 MobiDBLite consensus disorder prediction 463 477 - -
Car01g02461 782 ProSiteProfiles Protein kinase domain profile. 526 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02461 782 SUPERFAMILY Protein kinase-like (PK-like) 501 774 IPR011009 -
Car01g02461 782 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 29 333 - -
Car01g02461 782 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 334 780 - -
Car01g02461 782 Pfam Protein tyrosine and serine/threonine kinase 527 774 IPR001245 GO:0004672|GO:0006468
Car01g02461 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Car01g02461 782 MobiDBLite consensus disorder prediction 463 485 - -
Car01g02461 782 CDD STKc_MAP3K-like 532 774 - -
Car01g02461 782 Gene3D Transferase(Phosphotransferase) domain 1 605 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02461 Car-Chr1 50293326 50312754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02461 1 782 MAP Kinase Kinase Kinase AT3G58640 69.249 0.0 1143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Car01g02461 PK_Tyr_Ser-Thr 1.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02461 - - gmx:100810612 1398.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02461 01 50293326 50312754 Car01g02461 01 50293326 50312754 ECH