Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g02459 | ATGTATTCCGACTTACACAACAAAGCGTTAACAAGCACTCGCTTTTCTGAACTCAACCCACCACTTTCTGATCTCGTTCTCCAAGCTCTCTCTCACTCAGGTTTCAACTTCTGCACTCCCGTTCAAGCCGCTACCATTCCTTTGCTCTGCACCTACAAAGACGTTATCGTCGACGCCGCCACTGGCTCAGGAAAAACCGTAGCTTTTGTCATTCCACTTGTCGAGATTCTTCGCCGCTCCTCTTCTAATCCCAAACCTCACCAGGTTCTGGGAGTAATTATATCTCCTACAAGGGAACTATCATCCCAAATATATCAAGTTGCACAACCTTTCATTTCAACTTTATCAAATGGTAAGTTGATGCTACTTGTTGGTGGAGTGGATGTAAAAACAGACATGatgaaaattaaggaagaagagagacaaccactctag | 435 | 0.4092 | MYSDLHNKALTSTRFSELNPPLSDLVLQALSHSGFNFCTPVQAATIPLLCTYKDVIVDAATGSGKTVAFVIPLVEILRRSSSNPKPHQVLGVIISPTRELSSQIYQVAQPFISTLSNGKLMLLVGGVDVKTDMMKIKEEERQPL | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g02459 | 144 | PANTHER | RNA HELICASE | 26 | 138 | - | - | |
Car01g02459 | 144 | Pfam | DEAD/DEAH box helicase | 39 | 137 | IPR011545 | GO:0003676|GO:0005524 | |
Car01g02459 | 144 | Gene3D | - | 3 | 143 | IPR027417 | - | |
Car01g02459 | 144 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 46 | 144 | IPR014001 | - | |
Car01g02459 | 144 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 10 | 138 | IPR027417 | - | |
Car01g02459 | 144 | PANTHER | ATP-DEPENDENT RNA HELICASE DDX55 | 26 | 138 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car01g02459 | Car-Chr1 | 50269305 | 50269739 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car01g02459 | 26 | 139 | Eukaryotic Initiation Factors Gene Family | AT5G11200 | 33.333 | 2.80e-11 | 58.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g02459 | K14809 | - | gmx:100801482 | 225.713 |