Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02438 ATGGCACAATTGCCTCCTAAGATCCCAAACATGTCACCAAGTTGGTCAGATTTTTCCACTCATCAAAATTATATGCCAACACCAATTTCAACCATGTTACCATCCAATAATATTGTCAATACAAataattattatcataatcatcaacatcaacatcaacatcaGAACCCTTCATGGGTGGATGAGTTTCTTGACTTCTCATCGGCAAGGCGAGGCGCTCACCGAAGGTCGGTGAGTGACTCAGTCACCTTCTTAGAAACACCTATGATCGACGATTGTCGACGTGGAAAACACGGTGGAAACAACGATGACAATGAGTTTGATAAATTTGATGACGAACAATTAATGTCCATGTTCAATGATGATATATCAGGTCTTCACATGCCACCAACTTTGTCTTCCTCAAACCCTTCGAGTCCTTCGGATCAGAACTTCGTCAATGATGATCAGAAAAAGATAAACAAACAAGAGAAGAAAGAAAATGATTTGGAGGATCAAAAGGAAGTGGAAGAAGATGAAAAACAATTGAAAAATGAACCTGATGAGGTTGAAAGCCCATGCAAACAAGAAAATTCACAGCCTCAAAATAACAATAACAATGTTACTTCTTCTAATGATAGAATTACTGATCCCAAGAGAGTCAAAAGAATCTTGGCAAATAGGCAATCAGCACAAAGGTCACGTGTGAGGAAGCTGCAATACATATCCGAGCTTGAGAGAAGTGTAACTTCATTACAGGCGGAAGTTTCAGTGCTTTCTCCACGGGTAGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTTGACAATAGTGCTCTCAAGCAAAGAATTGCAGCCCTTGCTCAAGACAAGATTTTCAAAGATGCTCATCAAGATGCACTGAAGAGGGAAATAGAGAGACTAAGACAAGTATATCATCATCAAAACCTAAAGAATATGGAAAATGCTGCAGGGTCACCCTTACCATCCCCATCACAAACGCCAATATGTGATGCTCACACAGAAAAGGAACAACTTCTCAATGTATGA 1029 0.3839 MAQLPPKIPNMSPSWSDFSTHQNYMPTPISTMLPSNNIVNTNNYYHNHQHQHQHQNPSWVDEFLDFSSARRGAHRRSVSDSVTFLETPMIDDCRRGKHGGNNDDNEFDKFDDEQLMSMFNDDISGLHMPPTLSSSNPSSPSDQNFVNDDQKKINKQEKKENDLEDQKEVEEDEKQLKNEPDEVESPCKQENSQPQNNNNNVTSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQDALKREIERLRQVYHHQNLKNMENAAGSPLPSPSQTPICDAHTEKEQLLNV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02438 342 MobiDBLite consensus disorder prediction 127 147 - -
Car01g02438 342 MobiDBLite consensus disorder prediction 148 186 - -
Car01g02438 342 Gene3D - 211 310 - -
Car01g02438 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 215 230 IPR004827 GO:0003700|GO:0006355
Car01g02438 342 SUPERFAMILY Leucine zipper domain 212 266 IPR046347 GO:0003700|GO:0006355
Car01g02438 342 SMART brlzneu 208 272 IPR004827 GO:0003700|GO:0006355
Car01g02438 342 PANTHER BASIC LEUCINE ZIPPER 34 1 340 - -
Car01g02438 342 CDD bZIP_plant_RF2 213 263 IPR044759 GO:0003700|GO:0006355
Car01g02438 342 Pfam bZIP transcription factor 212 255 IPR004827 GO:0003700|GO:0006355
Car01g02438 342 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 340 - -
Car01g02438 342 MobiDBLite consensus disorder prediction 121 213 - -
Car01g02438 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 262 IPR004827 GO:0003700|GO:0006355
Car01g02438 342 Coils Coil 146 179 - -
Car01g02438 342 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02438 Car-Chr1 50097672 50101262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02438 1 289 bZIP Transcription Factor Family AT3G58120 54.870 1.06e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car01g02438 bZIP_1 3.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02438 - - cam:101507538 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02438 01 50097672 50101262 Car01g02438 01 50097672 50101262 ECH