Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02426 ATGACTCAGTGTAGTTACCCTGAAAATAATCATAGTACTGTCATTGTGGAGAGGCGTAAAGATAGCTTAATCAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCATGAACAGGCTGCTGGAATTCATGAGTTACCTGGATTACCTGCTGGAGTGAAGTTTGATCCTACTGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGCGCTCTGATATTCAAAAGCTTCATCCTTTAATTGACGAGTTCATTCCTACTCTTGAAGGAGAGAATGGAATCTGCTGTACTCATCCAGAGAAGTTACCAGGTGTTAGCAAAGATGGCCTACTCAGACATTTCTTTCACAGGCCATCAAAAGCATACACAACAGGAACAAGAAAAAGGAGAAAAGTGCACACAGATGAAGATGGAAGCGAGACAAGGTGGCACAAAACAGGTAAAACAAGACCAGTCTATGTGAGTGGCAAGTTAAAAGGGTATAAGAAAATCCTTGTGCTTTACACTAACTACAGAAAGCAGAAAAAACCAGAGAAAACAAATTGGGTTATGCACCAATACCACCTTGGAAACAATGAAGAGGAGAAGGAGGGGGAATTGGTAGTTTCCAAAGTTTTCTATCAAACACAACCTAGGCAATGTGGTGGTTCATTGATGAAAGATTCATCAATGATATTTTCTGATAAACTTAATGGTGGTCAAGATGTGCATGAGGTAGTTAATCATAAAAACAGTGGATTTGTTGAATACTACAATACTTCTTTCATATCATTTGATCAAGGGGAGCAACAACATAGATCAAGCAATGCACAAGTGATTTCTCATTTTCCTGTTCATGATGGTACTCCTTTCATTCCTTGA 861 0.3879 MTQCSYPENNHSTVIVERRKDSLIRTCPTCGHHIKCHEQAAGIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQKLHPLIDEFIPTLEGENGICCTHPEKLPGVSKDGLLRHFFHRPSKAYTTGTRKRRKVHTDEDGSETRWHKTGKTRPVYVSGKLKGYKKILVLYTNYRKQKKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGGSLMKDSSMIFSDKLNGGQDVHEVVNHKNSGFVEYYNTSFISFDQGEQQHRSSNAQVISHFPVHDGTPFIP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02426 286 MobiDBLite consensus disorder prediction 122 144 - -
Car01g02426 286 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 285 IPR044799 GO:0003700
Car01g02426 286 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Car01g02426 286 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Car01g02426 286 MobiDBLite consensus disorder prediction 128 144 - -
Car01g02426 286 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Car01g02426 286 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 285 - -
Car01g02426 286 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02426 Car-Chr1 50012761 50014941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02426 25 286 NAC Transcription Factor Family AT4G28500 64.184 1.81e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car01g02426 NAM 1.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02426 - - gmx:100791648 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02426 01 50012761 50014941 Car01g02426 01 50012761 50014941 ECH