Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02423 ATGGGTGTTGACTATTACAAGGTTTTGCAGGTTGATAGGAACGCTAAAGACGATGACTTGAAGAAAGCTTACAGAAAGCTCGCTATGAAATGGCACCCAGATAAAAACCCTAACAACAAAAAAGAAGCCGAAGCCAAATTCAAACAAATCTCAGAAGCCTATGATGTACTGAGTGATCCTCAGAAGAAAGCTATTTATGATCAATATGGGGAAGATGGTCTGAAGGGTCAAATGCCCCCACCTGATTCTTCTGCTGGTGGCAGTGGAACTACTTACTATTCGGCCGATGATTTTCCGTTTCGGTTCAATCATCGGAATGCTGATGATATTTTTGCTGAGTTTTTTGGGGTTTCAAGTCCCTTTGGTGGTATGGGAAGAGGGGGTGGTGTTGGATCAAGGTTTCCTAATGGCATGTTTGGATCCTTTGGGGAAGGAGGAGGAGGGGGTGGAGTCCATATGCATCAAGGTCCTCCTCGTAAGCCGCCTCCTATTGAGAACAAATTGCTATGCACTCTTGAGGAGATTTTTAAAGGGACCACAAAGAAGATGAAGATCACCAGAGAAATTTTTGATGCTAATGGCAAAACCATGCAGTTGGACGAGATCTTGACGATTAATGTCAAACCTGGTTGGAAAAAGGGGACAAAGATCACCTTCCCTGAGAAAGGAAACGAACATCCGAATTTGACACCTGCAGATGTTGTTTTCATCATCGATGAAAAACCACACAGTGTCTTCACTCGCGAAGGAAACGATCTGATTGCGATTCAGAAGCTTTCTCTTGCAGAAGCCTTAACTGGTTATACGGTGAATCTGACTACACTTGATGGTAGAAACTTGACTATACCAATCAACAATGTGATTCAACCCGAGTATGAGGAGATTGTTCCGAGAGAAGGAATGCCACTCCCAAAGGATCCAACAAAGAAGGGAAACTTGAGGATAAAGTTCAACATCAAATTCCCAACTCGGCTCACCGCGGACCAGAAGGCGGGAATGAAGAAACTCTTGACCGCATAA 1020 0.4382 MGVDYYKVLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKKAIYDQYGEDGLKGQMPPPDSSAGGSGTTYYSADDFPFRFNHRNADDIFAEFFGVSSPFGGMGRGGGVGSRFPNGMFGSFGEGGGGGGVHMHQGPPRKPPPIENKLLCTLEEIFKGTTKKMKITREIFDANGKTMQLDEILTINVKPGWKKGTKITFPEKGNEHPNLTPADVVFIIDEKPHSVFTREGNDLIAIQKLSLAEALTGYTVNLTTLDGRNLTIPINNVIQPEYEEIVPREGMPLPKDPTKKGNLRIKFNIKFPTRLTADQKAGMKKLLTA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02423 339 Gene3D - 243 323 - -
Car01g02423 339 CDD DnaJ_C 162 325 - -
Car01g02423 339 SUPERFAMILY Chaperone J-domain 3 129 IPR036869 -
Car01g02423 339 CDD DnaJ 4 59 IPR001623 -
Car01g02423 339 Pfam DnaJ C terminal domain 165 322 IPR002939 -
Car01g02423 339 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 338 - -
Car01g02423 339 Gene3D DnaJ domain 3 125 IPR036869 -
Car01g02423 339 Pfam DnaJ domain 4 67 IPR001623 -
Car01g02423 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 254 IPR008971 GO:0006457|GO:0051082
Car01g02423 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Car01g02423 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Car01g02423 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Car01g02423 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Car01g02423 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Car01g02423 339 SMART dnaj_3 3 62 IPR001623 -
Car01g02423 339 Gene3D - 163 241 - -
Car01g02423 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 338 - -
Car01g02423 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 331 IPR008971 GO:0006457|GO:0051082
Car01g02423 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02423 Car-Chr1 49992553 49995562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02423 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.11e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02423 K09510 - gmx:100797487 516.538