Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02408 ATGGCAATGAAGGCTTCTCTTCTTTTGATTATTTCAATGTTTATGATCAGCTCTTCATTATCATATGCTATCAAATTTAACGTTGGTGGCAAATATGGCTGGTCACTCAAACCATCATCGGACTATAGTCCTTGGGCTCAGAAAAATCGCTTTCTAGTCAATGACACACTTTTTTTTAAGTACAACAAAGGATCGGATTCAGTGTTGTTGGTAAACAAACAAGAGTATGATTCATGCAACACAAAGAATCCAATTACCAAGATGGACGGTGGAGATTCAATTTTCACTTTGGATAAATCAGGTCCATTTTTCTTCATTAGTGGCAATGTTGAAAATTGTGAACACGGTCAAAAGTTAATTGTTGTTGTTATTTCACCAAACCACCATAAAAAACAACAAGGTCCATCATCATCACCTTCTGCGGTCGCACCGGTATACTCTCCTGCACCATCTCCTGCTCATTCGGGATCTACGAGGATTAGTGGTTATGTTTGTTTCAGTGTTGTGGTGGCTTTGCTCTTAGGAACATTTGCTTTCTAG 540 0.3852 MAMKASLLLIISMFMISSSLSYAIKFNVGGKYGWSLKPSSDYSPWAQKNRFLVNDTLFFKYNKGSDSVLLVNKQEYDSCNTKNPITKMDGGDSIFTLDKSGPFFFISGNVENCEHGQKLIVVVISPNHHKKQQGPSSSPSAVAPVYSPAPSPAHSGSTRISGYVCFSVVVALLLGTFAF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02408 179 CDD OsENODL1_like 25 124 IPR041846 -
Car01g02408 179 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Car01g02408 179 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
Car01g02408 179 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 140 - -
Car01g02408 179 Gene3D - 22 128 IPR008972 -
Car01g02408 179 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Car01g02408 179 PANTHER BLUE COPPER PROTEIN 1 140 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02408 Car-Chr1 49807397 49808709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02408 1 153 Phytocyanin Superfamily AT4G28365 50.318 1.27e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02408 - - gmx:100802438 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02408 01 49807397 49808709 Car01g02408 01 49807397 49808709 ECH
Car01g02408 01 49807397 49808709 Car06g02017 06 20150086 20150936 PCT