Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02405 ATGTCTCTTCTCATAAACCTTAACATAACTCTATTATTCGTTTCGTTATGTTCAGTTGTATCAGCAACTGAATTTGTTTATAACAGAAATTTCAACTCAACAAACATAAACATTTATGGAAATGCCACAATTCAAAACTCGATTCTCACTCTCACAAACCAAACATTCTTTTCAATTGGTCGTGCTTTTTACCCTTACAAACTACCTACAAAACCGAAAAACTCATCAACTTTTCATTCATTTGCAACCTCTTTCATATTTTCTATTGCTCCTTGTAATAATTTTCCAGTTGCACATGGTTTTGCTTTCATTTTCTCACCTTCAAAGGTAATAAATGGTGCACTATCAGGTAATTATCTCGGACTATTTAACCGATCGTCGTCAGGTAATTCATCTAACCATGTTTTTGCTGTTGAGTTTGATGATTTTAGAAATGAAGAGTTCAATGAAATGAATGGTAATCATGTTGGTGTTGATTTGAATTCAATGATTTCTGAGTATTCCGAACCGGCCGAGTTTTGGGGTGGAGAAAATGGTGAAGAATTAGAAAGTTTGAAACTTTCTAGTGGTGAAAATTATCAAGTTTGGATTGAGTTTATGAATTCTCAAATTAATGTTACTATGGCTCCTGCAGGAATAAGAAAACCTCAAAAACCTCTGATTAGTAAGCCAATTAACATTTCTAGGGTTTTTTTGGATGAAATGTATGTTGGATTTTCTGGAGCAACAGGTAGAATGGTTGATACTTGTAGAATTTTGGCTTGGAGTTTTAGTCATTCAAATTTTTCAATTGGTGATGCTTTGAATACTAAAGATTTACCTGTGTATATGAATCCAAAGAGATCTTTATATAAATCTAAGGGTTTTGTTATAGGTGTTATTTTTGGttcaattttagtatttggttgtttcactttggcatttttcattttgtcaAGAAAAAGGAAGGAAGATAAAGATGAAAAGTTTGAAGATTGGGAATTGGAGTATTGGCCACGTAAGATTAGGTATAAGGAGATTTCTGATGCAACAAGTGGATTTTGTGAAGAGAATGTGATAGGGATTGGAACAAGTGGGAAAGTATACAAAGGAGTTTTGAAAGGAGTAGAAGTTGCAGTGAAAAAAATCAATCATGATAATAATACTCCGCATGATGGAATAAAAGGCTTTCTAGCAGAGATTTCAAGCTTAGGAAGAATGAAACATAGAAACTTGGTTGGTTTTAGAGGTTGGAGTAAAGGAAAAGGAGGGAAATTGATACTTGTTTATGATTACATGGAGAATGGAAGTTTAGACAGAAGAATCTTTGATTGTGAAGAGACCAAGTTGCTTAATTGGGAAGAAAGATTAAGAGTTATAGAAAATGTAGCTAGTGGAGTTTTATATCTACATGAAGGTTGGGGATTTGAGGTTTTGCATAGAGACATAAAAGCCAGTAATGTGCTACTTGACAAAGATATGAATGGAAGAATAGGTGATTTTGGTCTTGCAAGGTTGCATCATCATCATAAGGAACAAGAAGCAGATGACACAACAAGAGTGATAGGTACTTTAGGGTACATGGCACCAGAACTTGTCAAACTTGGTAAACCATCAACTTCAACTGACGTTTATAGTTTTGGAATATTAGTTTTAGAAGTTGTATGTGGTAGAAGACCAATTGTAATGGATGAGCCACCATTGGTTGAATGGATATTTTCTCTTATGGAGAAAGGTGAATTGAGTTTTGCAGTTGATGAACGTTTGAAGGGTCAAAAGGGGTGTAAATATAACACTTTTGAAGCTGAGAGATTGCTTCATTTGGGTTTGTTGTGCGCTAGTTTTGACCCTAGTGTTAGGCCAACAATGAGACAGATTGTGAAAGCTTTGGAGGGTGTAAAATGCAGTGAGTGTAATGAAGAGTGTGTTCACCATGAGAGTCTTATTAGAAAAATAAACTCAGCAGCTTCTTGGAATTCTACGAATTCTGCTCATGCAAATTTTCCTACTCTTGATGAAATTGTACCATTTAAATCTTTTTATGCAGAATCTTTAAGTGCGTCTTATCCCAGCTTAGAGCCATTTACTGATTCTCTCTCAGAAGGAAGTTTTAAGGATAATCATCGGAATAAAGAATACTCAAGGTCTAGCTTATTTGGAGTTGGTTTGTGTACACTATACCCAAACATGGAAGTTGATGTGTGCTTGTGA 2190 0.3411 MSLLINLNITLLFVSLCSVVSATEFVYNRNFNSTNINIYGNATIQNSILTLTNQTFFSIGRAFYPYKLPTKPKNSSTFHSFATSFIFSIAPCNNFPVAHGFAFIFSPSKVINGALSGNYLGLFNRSSSGNSSNHVFAVEFDDFRNEEFNEMNGNHVGVDLNSMISEYSEPAEFWGGENGEELESLKLSSGENYQVWIEFMNSQINVTMAPAGIRKPQKPLISKPINISRVFLDEMYVGFSGATGRMVDTCRILAWSFSHSNFSIGDALNTKDLPVYMNPKRSLYKSKGFVIGVIFGSILVFGCFTLAFFILSRKRKEDKDEKFEDWELEYWPRKIRYKEISDATSGFCEENVIGIGTSGKVYKGVLKGVEVAVKKINHDNNTPHDGIKGFLAEISSLGRMKHRNLVGFRGWSKGKGGKLILVYDYMENGSLDRRIFDCEETKLLNWEERLRVIENVASGVLYLHEGWGFEVLHRDIKASNVLLDKDMNGRIGDFGLARLHHHHKEQEADDTTRVIGTLGYMAPELVKLGKPSTSTDVYSFGILVLEVVCGRRPIVMDEPPLVEWIFSLMEKGELSFAVDERLKGQKGCKYNTFEAERLLHLGLLCASFDPSVRPTMRQIVKALEGVKCSECNEECVHHESLIRKINSAASWNSTNSAHANFPTLDEIVPFKSFYAESLSASYPSLEPFTDSLSEGSFKDNHRNKEYSRSSLFGVGLCTLYPNMEVDVCL 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02405 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Car01g02405 729 Gene3D - 21 271 - -
Car01g02405 729 Pfam Legume lectin domain 23 261 IPR001220 GO:0030246
Car01g02405 729 Gene3D Phosphorylase Kinase; domain 1 309 425 - -
Car01g02405 729 ProSiteProfiles Protein kinase domain profile. 347 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02405 729 CDD lectin_legume_LecRK_Arcelin_ConA 23 258 IPR001220 GO:0030246
Car01g02405 729 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 262 IPR013320 -
Car01g02405 729 Gene3D Transferase(Phosphotransferase) domain 1 426 649 - -
Car01g02405 729 PANTHER LECTIN RECEPTOR KINASE 6 671 - -
Car01g02405 729 PANTHER - 6 671 - -
Car01g02405 729 Pfam Protein kinase domain 349 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02405 729 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Car01g02405 729 SMART serkin_6 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02405 729 SUPERFAMILY Protein kinase-like (PK-like) 324 624 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02405 Car-Chr1 49784949 49787440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02405 20 576 Receptor kinase-like Gene Family AT4G04960 52.197 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car01g02405 Pkinase 4.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02405 - - mtr:MTR_2g090410 1069.68