Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02401 ATGGAGCCTTTGCTCAGAGGCGAAAACAGTGGCCCCAGAAACCGTTCCAAAAGAATATTCCGCCGCACCGATGCTTTCACCTACGGCTCCAATTACGAAAAAGCCGCCGCACTCGTCGATCTGGCTGAAGATGGTGTTGGTATACCCGAGCAAATTCTGGACTCATCAAGCTTTCAAAGTTATGCAAGATATTATTTTATGTTTACTAAATGCAACCTCATCTGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAAGAATACCCTACATTCTTGCAAAGATAGGGAATATTTCTTTTTGGGGGAGTTGCCATATCTAACTGCCGcagagtgtcttatttatgagGGAATAGTCCTTATTTTGCTAATCATTCATACCCTCTGGCCATTATCATACGAAGGATCCCAAATATATTGGAAAAATGCTATTAATCTATTAAAGGCGTTCTGTCTGTTAGTAATCATTGCTGATATGCTGGTTTATGCTCTGTATATGTCTCCATTGGCTTTTGATTATCTACCTTTCAGAATTGCACCTTATGTCAGAGTTATTCTTTTCGTTCTGAATATAAGGGAGCTACGAGAAACCATCATCATCTTGGTTGGAATGCTTGATACATACTTAAATATCTTGGCTTTGGGGCTTCTGTTTCTTGTTTTTGCAAGTTGGGTGGCTTATGTGATTTTTGAAGATACAATACAGGGGAAAACAGTGTTCACTTCCTATAGTGCTACGTTATATCAGATGTTTCTTTTATTTGCCACAGCCAATAACCCAGATGTTTGGGTTCCTGCATACAAGTCTTCGCGATGGCATTGCTTGTTTTTCATTCTGTTTGTGCTGGTGGGAGTCTACTTTGTTACAAACTTGATCCTTGCCGTTGTTTACGATAGTTTCAAGAGTGAGCTTGTAAAACGAGTTTCTGAGATGGATCGTATGAGAATAACTATGTTGGAGAAAGCTTTTAAACTCCTAGATACACATAATGTTGGATGTCTCAACAAAGATCAATGCATTGGGCTCTTCGAGGAAGTGAACAAGTACAGGACTTTGCCAAAAATCTCCAAGGAAGAATTTGAGTTGATATTTGATGAGCTGGATGACACTCATGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAATTCCAGAAGGAGGATGCGCTTTCTTACTTTGACTATTTAGAATTCTACCATTCACCCACCTCAAAGAGATTGAAAGTCTTCGTAAAGAGCCCTATGTTTGGATACATAGTGTCCTTTGTACTCATAGTGAATCTGGTTGCTGTAATCATTGAGACAACGCTTGATATAGAAAACAACTCTGGTCAAAAGGTGTGGCAAGTGGTCGAGTTTGTTTTTGGGTGGATATATGTACTTGAAATGATTCTAAAGGTTTATTCATATGGATTCGAAAATTATTGGCGGGATGGTCAAAATCGCTTTGATTTTGTAATCACGGTGATAATTGTTATTGGAGAAACTATAACTTTTGCTTTACCTGATGATCGTGTACCATTTATCTCAAATGGGGAATGGATTCGTTACCTCCTTCTTGCAAGAATGTTGAGATTGATAAGACTTCTAATGCATGTCAAGCGATTCCGAGGTTTTGTGGCAACTTTCTTATCTCTTATACCGAGTTTGATGCCATACCTCGGGACCATATTTTGCGTCTTGTGTATTTATTGCTCAATTGGTGTCCAGATTTTTGGTGGACTAGTTAATGCTGGAAACCCAGATTTGGAAGCAACAGACCTTGCTGTTAATGACTATTTACTTTTTAATTTCAATGATTATCCAAATGGAATGGTGACACTATTCAATTTGCTAGTCTCAGAGATCTGGGAAGAATTGATGGAGAGCTACAAGGATTTAACTGGAACTTCTTGGACCTATGTGTACTTCATTAGCTTCTACTTAATTACTGTTTTGCTGCTTTTGAATTTGATTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGGTGGAGTCATCAGAAACTTGTGATGGAAATGACAAGGAAATTGAAGGAGATAGATATCGGGGGCGGCGATCTATTGGAACAAAATCACGAAGCCAGAGGGTTGCTGTTCTTCTTCATCATATGCTGAGTGCTGAGCTGAGTCAAAATCAACCTTCCAATACATAA 2208 0.3845 MEPLLRGENSGPRNRSKRIFRRTDAFTYGSNYEKAAALVDLAEDGVGIPEQILDSSSFQSYARYYFMFTKCNLIWSLSYFALIVLNFLEKPLWCEKNTLHSCKDREYFFLGELPYLTAAECLIYEGIVLILLIIHTLWPLSYEGSQIYWKNAINLLKAFCLLVIIADMLVYALYMSPLAFDYLPFRIAPYVRVILFVLNIRELRETIIILVGMLDTYLNILALGLLFLVFASWVAYVIFEDTIQGKTVFTSYSATLYQMFLLFATANNPDVWVPAYKSSRWHCLFFILFVLVGVYFVTNLILAVVYDSFKSELVKRVSEMDRMRITMLEKAFKLLDTHNVGCLNKDQCIGLFEEVNKYRTLPKISKEEFELIFDELDDTHDVKINKDEFADICNAIALKFQKEDALSYFDYLEFYHSPTSKRLKVFVKSPMFGYIVSFVLIVNLVAVIIETTLDIENNSGQKVWQVVEFVFGWIYVLEMILKVYSYGFENYWRDGQNRFDFVITVIIVIGETITFALPDDRVPFISNGEWIRYLLLARMLRLIRLLMHVKRFRGFVATFLSLIPSLMPYLGTIFCVLCIYCSIGVQIFGGLVNAGNPDLEATDLAVNDYLLFNFNDYPNGMVTLFNLLVSEIWEELMESYKDLTGTSWTYVYFISFYLITVLLLLNLIVAFVLEAFFAEMEVESSETCDGNDKEIEGDRYRGRRSIGTKSRSQRVAVLLHHMLSAELSQNQPSNT 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02401 735 Gene3D - 310 393 - -
Car01g02401 735 SUPERFAMILY EF-hand 317 412 IPR011992 -
Car01g02401 735 Gene3D - 202 309 - -
Car01g02401 735 Gene3D - 421 556 IPR027359 -
Car01g02401 735 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 732 IPR044581 GO:0005245
Car01g02401 735 SUPERFAMILY Voltage-gated potassium channels 429 676 - -
Car01g02401 735 Gene3D - 557 708 - -
Car01g02401 735 Pfam Ion transport protein 127 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car01g02401 735 Pfam Ion transport protein 430 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car01g02401 735 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02401 1 735 Ion Channels AT4G03560 67.120 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02401 K16900 - gmx:100806160 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02401 01 49721899 49746099 Car01g02401 01 49721899 49746099 ECH