Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02390 ATGCCTCAACTTAAGCTTCTTATCATTATTCTACATACTGTAACCATAATTATGTGTTGTGTTTGCACTACTGAATTTGTTTATAACACAAACTTCAACTCCACAAACATAAAATTATATGGAAATTCCACCATTCAAAAATCCATTCTCTCACTTACTAATAGCACTAGCGATTCCTTCTCAATAGACCGTGCTTTTTACCCTCAAAAAGTGCTTACAAAACCACCAAACTCTTCTTCCACTCTTCTCCCTTTTGCTACTTCCTTCATTTTCTCTGTTGCCCCTGTCAAAAAATCTATCACAGGACATGGCTTTGCCTTCATATTCACACCTTCAAGAGGTCTAAATGGAACAACATCGACCGAGTATATCGGTCTCTTCAATTTCACCAATGAAGGTAATCATAGCAACCATGTTTTTGGAGTCGAATTCGACGTAGTTAAAAACGAAGAATTCGAGGATATAAATGATAATCATGTTGGTGTTGACGTAAACTCGCTTAAATCGTTAACTTCACATGAGGCTGGCTATTGGGGTGGGAAAGATGACAAGAAATTTCATGTGTTGAGCATAAAAAATGGAGAAAATTATCAAGTTTGGATTGAATTTATGAACTCCCAGTTGAACATTACGATGATTCAGGCAGGACATAAGAGGCCTCGTGTGCCTCTTATCAATACAACTGTTAACCTTTCCGGCATTCTTATGGATGAAACATATGTTGGATTCTGTGCAGCCACAGGGTTGAAAAAAGATAGTATTAAGATTCTTGCTTGGAGCTTTAGTAATTCTAATTTTTCTATTGGTGATGCTTTAGTGACAAAGAATTTGCCTTCATTTGTCCCTCATAAGAAGTGGTTTTCGGGAGCCATAAATGTAGGAGTCACTAGTACTGTCTTTGTGCTAATAATCATTTGTTGTGGTTGTGTAGTTTTCTTCATTTACTATAGGGGTAAAAATGGAGAGGAGGAAATTGAAGATTGGGAACTAGAATATTGGCCACATAAGATTAGTTTCCAAGATATTCATGCAGCAACAGGAGGATTCTCTGAAGAGAATGTGATTGTTGTAGGAGGGAACAAAAGTGTATATAAAGGGGTTTTGCAAGGAGTAGAAGTTGCTGTCAAGAGAATCCCTCAAGAAAGAGAAGGGATGAGAGAGTTTTTAGCTGAGGTTTCAAGCCTAGGAAGAATGAAACACAGAAACTTAGTAGGATTCAAAGGTTGGTGCAAAGAAGAAAAGGGAAACTTGATTCTAGTTTATGACTTCATGCACAATGGAAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGCTAACATGGGAAGAGAGGATTCAAGTTTTGAAAAATGTGTCTGCAGGGATTCTATACCTGCATGAGGGCTGGGAAGTTAAGGTCTTGcatagggatatcaaagcaagcaatgttctacttgacaaagacatgaaagctagattaggggattttggattggcTCTTATGCATGAGCATCATGGACAAGTGGCAAGCACAACAAAAGTACTAGGGACATTAGGATACATCGCTCCGGAAGTGATTCGAACAGGAAAAGCGTCGACTATGTCTGATGTGTTCGGCTTTGGAATATTGATGTTGGAAGTAATTTGCGGGCGAAGACCTATTGAAGAACATAAGCCAGGGCTAATTGAATGGTTGGAGTCTCTAATGGTGCTTAACCAATTGCACAATGCCATCGATGAAAGGTTGAAGGCGAAAGGAGGATACTCCATTGAGGAAGGTGAGAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGACCCTTGTGTTAGACCAATAATGAGACAGGTTGTGAAAATGTTGGAGGGAGAAATGGACAACAACATTGAAGCTGATGAAGAAAATATGGAGACAAGTTTACTTGGAAGAATAACATCAGCTGCAATGTGGTCTACAACTGAAACTTCATTTCTAAACAAAGATCACCCTACTTTTGAAGAAATTAGAATGTTTAGTTATAATTCTAAGACCTCTACAAGTGGCTCAAATACCATTCCACCATCAGATTCAGATATCATTAGGGAAGGCAGCAAATGCAGCTTCTGA 2094 0.3706 MPQLKLLIIILHTVTIIMCCVCTTEFVYNTNFNSTNIKLYGNSTIQKSILSLTNSTSDSFSIDRAFYPQKVLTKPPNSSSTLLPFATSFIFSVAPVKKSITGHGFAFIFTPSRGLNGTTSTEYIGLFNFTNEGNHSNHVFGVEFDVVKNEEFEDINDNHVGVDVNSLKSLTSHEAGYWGGKDDKKFHVLSIKNGENYQVWIEFMNSQLNITMIQAGHKRPRVPLINTTVNLSGILMDETYVGFCAATGLKKDSIKILAWSFSNSNFSIGDALVTKNLPSFVPHKKWFSGAINVGVTSTVFVLIIICCGCVVFFIYYRGKNGEEEIEDWELEYWPHKISFQDIHAATGGFSEENVIVVGGNKSVYKGVLQGVEVAVKRIPQEREGMREFLAEVSSLGRMKHRNLVGFKGWCKEEKGNLILVYDFMHNGSLDKWIFECEEGKMLTWEERIQVLKNVSAGILYLHEGWEVKVLHRDIKASNVLLDKDMKARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGKASTMSDVFGFGILMLEVICGRRPIEEHKPGLIEWLESLMVLNQLHNAIDERLKAKGGYSIEEGERLLHLGLLCSNSDPCVRPIMRQVVKMLEGEMDNNIEADEENMETSLLGRITSAAMWSTTETSFLNKDHPTFEEIRMFSYNSKTSTSGSNTIPPSDSDIIREGSKCSF 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02390 697 SUPERFAMILY Protein kinase-like (PK-like) 325 618 IPR011009 -
Car01g02390 697 CDD STKc_IRAK 358 619 - -
Car01g02390 697 CDD lectin_legume_LecRK_Arcelin_ConA 24 264 IPR001220 GO:0030246
Car01g02390 697 Pfam Legume lectin domain 24 265 IPR001220 GO:0030246
Car01g02390 697 Pfam Protein kinase domain 356 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02390 697 ProSiteProfiles Protein kinase domain profile. 349 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02390 697 PANTHER - 1 681 - -
Car01g02390 697 Gene3D Phosphorylase Kinase; domain 1 317 423 - -
Car01g02390 697 Gene3D Transferase(Phosphotransferase) domain 1 424 641 - -
Car01g02390 697 Gene3D - 22 274 - -
Car01g02390 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Car01g02390 697 PANTHER LECTIN RECEPTOR KINASE 1 681 - -
Car01g02390 697 SMART serkin_6 349 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02390 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 264 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02390 Car-Chr1 49652326 49655983 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02390 21 565 Receptor kinase-like Gene Family AT4G04960 54.867 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car01g02390 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02390 - - mtr:MTR_2g090410 1044.65