Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02386 ATGGCTGCAGCTAAGAAAAGTGGCAAATTCAACAAGGATTTGGGTGATGAAACTCACAATCACCACAAAGCTACACAAATTGGTGAAAGTAATTGGGAGATTGAAAAAGGAAAAGGTATTGAATTAAGCAATTCTCAAAGAAAGCTAGTTTTTGATGAAGCTTTCAGTTCACATAGTAATAGGCCTCTTAAGAAAATCAAAAGCCCCCAACGTGAAAATCAAAACCAACCCTTTTCTTCTCTGTATAATAATACTAATATGTCACTACAACAACCTTCACCTTTCTCTTTTCCTCCTTCATCTTCAAGACTTGTTTTTCCATTTGCTTTTGATAATTCTTCACAACAATTCCCTCACCAATTTGGAACCAACAACAATTTACCTTTATACCCTCCACCACCTATTCAAACACCACAAAACCAACAACAAATGATATCTTTTGATTCACAACAACAAAACAATCTTGTTTCATATCCACCAATGTTATCCCAACAACAACATCATCAACAAGTTCTTCAATATTGGAGTGATGCATTGAATCTAAGTCCAAGAGGAAGAATGCTAATGATGATGAACAATAACAATTTGGGACAATATGGTAATAGACCAATGTTTAGGCCTCAAGTTCAAGCAATAAGCACTACAAAACTCTATAGAGGAGTGAGGCAAAGGCATTGGGGAAAATGGGTAGCTGAAATTCGTCTCCCTCGAAATCGAACTCGTCTCTGGTTAGGCACATTTGATACAGCTGAAGATGCTGCTTTAGCCTACGATCGCGAAGCGTTCAAATTGAGAGGAGAGAATGCAAGGCTCAATTTTCCTGAACTTTTTCTCAACAAGGGAAATGATGATAAAGAAAAAGAAACAGAAAATTCATCATCAACAACAACTTCATGTGTTACTTGTCCATCAAGTAACAGCACTACAAAGCAGCTAGAAACTCCTCTTGAAAGCCAAAACATTCAAACACTTGTTCCAATGGAAGAGTCTAATGAGAATGACTCTGGAATTGGATCGAGTGACGCTGCGGCTAGCGACGAGGTTTCGCAGTCACAGGAATTGGTTTGGAGTGAAATGTCAGCTTGGTTTAATGCTATTCCAGCTGCTTGGGGTCCAGGTAGTCCTGTTTGGGATGATTTGGATTTTCAATCACAAATTCCTTTTTCTAATCTCAATCAACAAGATTTCAATAATGATGATGTTGATCCTCAAAGACATGAACAAAACAACATGGAATCAAGTTCTTTCATTAGGCCTTTCTTTTGGAATAAAGATCAAGATTGA 1284 0.3754 MAAAKKSGKFNKDLGDETHNHHKATQIGESNWEIEKGKGIELSNSQRKLVFDEAFSSHSNRPLKKIKSPQRENQNQPFSSLYNNTNMSLQQPSPFSFPPSSSRLVFPFAFDNSSQQFPHQFGTNNNLPLYPPPPIQTPQNQQQMISFDSQQQNNLVSYPPMLSQQQHHQQVLQYWSDALNLSPRGRMLMMMNNNNLGQYGNRPMFRPQVQAISTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKGNDDKEKETENSSSTTTSCVTCPSSNSTTKQLETPLESQNIQTLVPMEESNENDSGIGSSDAAASDEVSQSQELVWSEMSAWFNAIPAAWGPGSPVWDDLDFQSQIPFSNLNQQDFNNDDVDPQRHEQNNMESSSFIRPFFWNKDQD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02386 427 Gene3D AP2/ERF domain 217 275 IPR036955 GO:0003700|GO:0006355
Car01g02386 427 MobiDBLite consensus disorder prediction 292 349 - -
Car01g02386 427 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 422 - -
Car01g02386 427 SMART rav1_2 217 280 IPR001471 GO:0003700|GO:0006355
Car01g02386 427 SUPERFAMILY DNA-binding domain 217 275 IPR016177 GO:0003677
Car01g02386 427 MobiDBLite consensus disorder prediction 69 96 - -
Car01g02386 427 MobiDBLite consensus disorder prediction 9 32 - -
Car01g02386 427 MobiDBLite consensus disorder prediction 279 349 - -
Car01g02386 427 CDD AP2 216 276 IPR001471 GO:0003700|GO:0006355
Car01g02386 427 MobiDBLite consensus disorder prediction 390 427 - -
Car01g02386 427 PRINTS Ethylene responsive element binding protein signature 218 229 IPR001471 GO:0003700|GO:0006355
Car01g02386 427 PRINTS Ethylene responsive element binding protein signature 240 256 IPR001471 GO:0003700|GO:0006355
Car01g02386 427 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 422 - -
Car01g02386 427 MobiDBLite consensus disorder prediction 1 32 - -
Car01g02386 427 ProSiteProfiles AP2/ERF domain profile. 217 274 IPR001471 GO:0003700|GO:0006355
Car01g02386 427 Pfam AP2 domain 218 266 IPR001471 GO:0003700|GO:0006355
Car01g02386 427 MobiDBLite consensus disorder prediction 53 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02386 Car-Chr1 49625989 49628151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02386 126 402 AP2-EREBP Transcription Factor Family AT2G20880 49.481 4.44e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car01g02386 AP2 3.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02386 - - gmx:100809887 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02386 01 49625989 49628151 Car01g02386 01 49625989 49628151 ECH