Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02380 ATGGGGTGTTGTGTCTCAACAAGTAATGAAGACACCACTTTTGATCATGTTGTCTCTTTGCAAAAGTTACAATCTTTACCAAACAGAATATGCAGCAATGGAAAAAGTCGGTCATCTTGTATATTTACACAGCAGGGTCGTAAGGGTATCAATCAAGATGCCATGATTGTATGGGAAGATTTCATGTCAGAAGATGTTGTTTTTTGTGGTGTATTTGATGGCCATGGTCCACATGGACACCTTGTCGCGCGCAAAGTTAGGGACGCCTTGCCAATAAAATTACTTTCGTTTTTGGATTCGAGGCGAAATGGCTCTGGTAAAGCTTGTTTTAAGAGGGATATAAAGGATGAAAGTGGAGAAGTTGAGAAGGATTTGTCTGCTGAGGATGAGGTGAATTCTATGTGGAGAGAAGCTTTCATGAAGTCATACAAGGCTATGGACAAAGAGCTGAAGTCTCATGCAAATTTGGATTGCTTTTGTAGTGGGAGCACAGCTGTGTCTGTAGTGAAGCAGGGTTTAAATTTGTTCATGGGAAATATTGGTGATTCGAGAGCAGTCATGGGATCCAAGGATAGCAATGACTTGATGGTGGCGATTCAGCTGACCGTTGATTTGAAACCTGATTTGCCAAGTTTGTCATACAACATCATCATTCATCCTATCTATGTTTTTAAGCTTGTTGTTAATGTTTTCAAATTTTGA 702 0.4003 MGCCVSTSNEDTTFDHVVSLQKLQSLPNRICSNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVVFCGVFDGHGPHGHLVARKVRDALPIKLLSFLDSRRNGSGKACFKRDIKDESGEVEKDLSAEDEVNSMWREAFMKSYKAMDKELKSHANLDCFCSGSTAVSVVKQGLNLFMGNIGDSRAVMGSKDSNDLMVAIQLTVDLKPDLPSLSYNIIIHPIYVFKLVVNVFKF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02380 233 ProSiteProfiles PPM-type phosphatase domain profile. 38 233 IPR001932 -
Car01g02380 233 PANTHER ALPHABET, ISOFORM E-RELATED 1 212 - -
Car01g02380 233 SMART PP2C_4 27 228 IPR001932 -
Car01g02380 233 PANTHER - 1 212 - -
Car01g02380 233 SUPERFAMILY PP2C-like 29 219 IPR036457 -
Car01g02380 233 CDD PP2Cc 37 229 IPR001932 -
Car01g02380 233 Gene3D - 26 217 IPR036457 -
Car01g02380 233 Pfam Protein phosphatase 2C 64 210 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02380 Car-Chr1 49563432 49567530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02380 1 226 PP2C-type Phosphatase Gene Family AT1G03590 63.877 7.68e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02380 - - gmx:100788149 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02380 01 49563432 49567530 Car01g02380 01 49563432 49567530 ECH
Car01g02380 01 49563432 49567530 Car06g03166 06 58091657 58096561 PCT