Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02373 ATGTGGAGATCAATGTGTGAGGTGAGATCTGCTGCACAGTACAAGAGAATGAAAATCTATATAGAAGTTCTAGTTGGATTCATTTTGGTATATGTGGTCCAGTTTTCACTTGCTGATACTAATCCAATTGATGTTGCTGCAATTAATAAATTATATGCTGCATTGGGAAATCCTGTTCTTCCTGGGTGGGTTGCTAGCGCAGGAGACCCGTGTGGAGAAGCGTGGCAAGGTGTTCAATGTAACGGTTCACTCATACAACAAATAAATCTGATTGGTGCAAATTTGGGAGGCGAACTGGGTGATAGCTTGGGAGAGTTTGTTTCTATCAAATCAATAATTCTAAGCAACAATCACATTGGAGGAATTATTCCATTAAGTTTGCCAGTAACCTTGCAAACTCTTTTTCTTTCAGCTAACAATTTCACTGGAAGTATTCCAACCTCTTTATCCACACTGACAGAACTGACTGCCACGTCTCTTAATGATAACCTGTTATCTGGAGAAATACCAGATGTCTTTCAGTCTCTTACACTGTTGATCAATTTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCCGTTGAGAATTTGTCGGCTGTGACCACCTTAAATTTACAGAACAATAAACTGTCTGGGACACTCGATGTTTTGCAAGACCTTCCACTGAAAGAATTAAATGTTGAGAACAACCTATTTTCTGGATCAATACCTCAAAAGATGTTAAGCATCCCCGACTTCAGAAAAGATGGAAACCTATTTAACCTTGATGGTAATGCTACAGTAGCTCCGGCTCATCCACCTCATTCTCCAGTAACCACCGCACCACCATCAGGAACTGTGGTTTCTGGGACACCGGCTTCTGGACGTGTACCTACTAAACATGCCGATGGACCAACTGCATCAAAACAATCAAGTTCCGGGAAATCGAAAAAAAACACCAAAAGAGTGGTTTGGATAACTATTTCTGGTATATTGGGGTTTATTATCTTGGCACTAGGACTTGTTCTCTTTATTCCAAGATGTGGCAGAAGGGAACGGGTTGAAAGAACCTCCAAACCACATCGGCCTGGAGCATATGGAGGCGAACGAAAGAGTCCTTGGGATAATGGGCCTCTAGTCCAACCACCTAGTGAAACTGAGAAAGTACCAAAAGTGGCTGTTACGAGGCCAAAAGAGAATCATCAAGCTGAGAAAGACGAACAAAGAATGGAAACACTGCCAAAGCTATTAAGTCATGAGATAGATATGAGTGCACTAGATGTACATTCAATGccacctccacctccacctccacctccTGCTCCACCACTTGCTGCTGAGAAGGTGATTGTCGAGCCAACAACATTCCCCGGAGGGGATAACGTCAATCCTTCCAAAAGAAGCCCAATTCCTCCCACCTTCGCAAAATGTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGATAATCTTATAGGATTAGGCATGCTGGGGAGTGTATATAGGGCAGAGCTTCCTGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCACCACAAAGATGATGAATTTCTTGAATTGGTAAACAATATTGACAGAATTCGGCATGCAAATATTGTTGAGCTTATTGGGTACTGTGTAGAGCATGGACAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCGATGTATGAAGCACTTCATTCAGATGATGAATTCAAAACAAGACTGTCTTGGAATGCTCGTATTCGGATAGCACTTGGGGCAGCCAGAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTGATACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATCTATCCGTGCGTGTATCTGACTGTGGTTTGGCTCCATTAATAACTAAAGGTTCCGTGCGTCAGCTCTCAGGACAGCTGCTAGCAGCTTATGGCTATGGTGCTCCAGAATTTGAATCAGGAATTTACACCTACCAGAGTGACGTGTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTACGACAGGACACGTCCTCGAGGTGAACAGTTTCTTGTAAGATGGGCAATTCCTCAACTTCATGATATTGATGCATtatcgaggatggttgatccttctctaaatggagcttaccctgcaaaatcgttgtcaaattttgccgacattatttctagatgtgttcagTCTGAGCCAGAATTTAGGCCAGCAATGTCTGAGGTTGTCTTGTACTTGCTAAATATGATAAGGAGGGAGTCTCAACAAAATGAATCAAATGAGAGATGA 2331 0.3994 MWRSMCEVRSAAQYKRMKIYIEVLVGFILVYVVQFSLADTNPIDVAAINKLYAALGNPVLPGWVASAGDPCGEAWQGVQCNGSLIQQINLIGANLGGELGDSLGEFVSIKSIILSNNHIGGIIPLSLPVTLQTLFLSANNFTGSIPTSLSTLTELTATSLNDNLLSGEIPDVFQSLTLLINLDLSNNNLSGELPPSVENLSAVTTLNLQNNKLSGTLDVLQDLPLKELNVENNLFSGSIPQKMLSIPDFRKDGNLFNLDGNATVAPAHPPHSPVTTAPPSGTVVSGTPASGRVPTKHADGPTASKQSSSGKSKKNTKRVVWITISGILGFIILALGLVLFIPRCGRRERVERTSKPHRPGAYGGERKSPWDNGPLVQPPSETEKVPKVAVTRPKENHQAEKDEQRMETLPKLLSHEIDMSALDVHSMPPPPPPPPPAPPLAAEKVIVEPTTFPGGDNVNPSKRSPIPPTFAKCFTIASLQQYTNSFSQDNLIGLGMLGSVYRAELPDGKILAVKKLDKRVSDHHKDDEFLELVNNIDRIRHANIVELIGYCVEHGQRLLIYEYCSNGSMYEALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCQPPVIHRNFKSANILLDDDLSVRVSDCGLAPLITKGSVRQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRPRGEQFLVRWAIPQLHDIDALSRMVDPSLNGAYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRESQQNESNER 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02373 776 MobiDBLite consensus disorder prediction 260 315 - -
Car01g02373 776 Gene3D Ribonuclease Inhibitor 46 149 IPR032675 -
Car01g02373 776 SUPERFAMILY Protein kinase-like (PK-like) 460 760 IPR011009 -
Car01g02373 776 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 28 775 - -
Car01g02373 776 MobiDBLite consensus disorder prediction 300 315 - -
Car01g02373 776 MobiDBLite consensus disorder prediction 387 405 - -
Car01g02373 776 ProSiteProfiles Protein kinase domain profile. 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02373 776 Pfam Leucine rich repeat N-terminal domain 44 81 IPR013210 -
Car01g02373 776 Pfam Protein tyrosine and serine/threonine kinase 489 758 IPR001245 GO:0004672|GO:0006468
Car01g02373 776 Gene3D Transferase(Phosphotransferase) domain 1 564 776 - -
Car01g02373 776 MobiDBLite consensus disorder prediction 350 364 - -
Car01g02373 776 SUPERFAMILY L domain-like 44 243 - -
Car01g02373 776 PANTHER OS01G0253100 PROTEIN 28 775 IPR045271 GO:0004714|GO:0006468
Car01g02373 776 Gene3D Ribonuclease Inhibitor 150 257 IPR032675 -
Car01g02373 776 Gene3D Phosphorylase Kinase; domain 1 460 563 - -
Car01g02373 776 MobiDBLite consensus disorder prediction 350 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02373 Car-Chr1 49518492 49526694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02373 30 767 Strubbelig Receptor Gene Family AT4G03390 62.698 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Car01g02373 PK_Tyr_Ser-Thr 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02373 - - mtr:MTR_2g090120 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02373 01 49518492 49526694 Car01g02373 01 49518492 49526694 ECH
Car01g02373 01 49518492 49526694 Car06g03174 06 58378432 58387056 PCT