Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02356 ATGAATTTCAATCAGAACGAGACAATTATGAGGGTAATAGAGCAGAGTGAAATTGCACCACCACCAGGTTCAGTTCCATCACCAACAACTCTCCCCCTCACTTTCTTCGACATTCCATGGTTTTATTGCCACCCTATTCAACGTATCTTCTTCTACCACTTTCCACACCCAACTCACCACTTCCTCCAAACAACACTTCCTATTCTCAAACACTCTCTTTCCATCACCCTCCAACACTTCTTTCCCTTTTCCTCCAACCTCATCGTTCCCCCAAATTCCCAAAATACCCCTTACATACGTTACCTTCATGGTGACTCTCTCTCCCTCACCGTCGCTGAATCCTCAGCAAACTTCAACATCTTAACATCCGATTCACAAGACATTCAAAATTGGCACCCTCTTGTTCCAAATTTACCCTCACCTCGTACCGAACAAAACGGTACACGTGTCATCCCTCTCATGGCTATTCAAATCACCGTTCTATCAAACTCTGGATTTAGTATATGCCTCACTTTTAACCATCTTGCTGGTGATGGAAAATCACTTCATCATTTCATGAAATTTTGGGCTTTTATTTCCAAAGCAAGAGCAAACAATTTTGAAATTGAACACTCTTTATTGCTTGATCTTCCTTCTCATGAAAGAGATAGAGTTAAAGATCCAAAGGGTCTTAAACTCACTTACTTAAAACAACTACAAGACATTGAATCAGAAAAAATGGAATTCGCAGGTCTTGTTCAAGATCCTAATGATGCTAATAAGGTACGAACTACTTTAGTATTAAACAATGAACAAATTCAGAAATTGAAGAAATGGGTTAGTGTTAAATGTAATGAAACAATACAACACGTGTCAACTTTTGTTGTTACGTGTTCTTTGATTTGGTTTTGTATGATAAAATCAGAACAAAGCAACAACGAAGGTGATTGTGTTGTTGATGATGATATCTGCTACTTTGTGTTTCTTGCGGATTGTCGCGATTGTCCTGAATTTTCAATACCAAAAAATTATTTTGGAAATTGTCTTGCTTCTTATATTGTGGTCGTAAAAAGGGATGAGTTAATTGGAAAAAATGGAATTGTTGTGGCTGCAAATGGTATTGAAAGGAAGATAAGAGATTTTAAGAGTGATCCTTTGTTAGGAGCTGAATCATTGATGTCTGATTATAGGGAGTTATCGAAATCTAATAAATCAATTTTAGTAGTTGCTGGGTCGCCGAAATTAGGTGTTTATGAGACTGATTTTGGGTGGGGGAAGCCTAATAAATCTGATCTAGTCCATCTTAGTTCATCGGGTTCGATTTCTCTATCTGATTGTAGAGATGGTGGTAGTGGAATTGAGGTTGGTTTGGCTCTTCAGAAAATTCGAATGACTAATTTCATCAACATCTTTGAAGAACAAGTTCATAATATTTGTAGCATGTGA 1425 0.3754 MNFNQNETIMRVIEQSEIAPPPGSVPSPTTLPLTFFDIPWFYCHPIQRIFFYHFPHPTHHFLQTTLPILKHSLSITLQHFFPFSSNLIVPPNSQNTPYIRYLHGDSLSLTVAESSANFNILTSDSQDIQNWHPLVPNLPSPRTEQNGTRVIPLMAIQITVLSNSGFSICLTFNHLAGDGKSLHHFMKFWAFISKARANNFEIEHSLLLDLPSHERDRVKDPKGLKLTYLKQLQDIESEKMEFAGLVQDPNDANKVRTTLVLNNEQIQKLKKWVSVKCNETIQHVSTFVVTCSLIWFCMIKSEQSNNEGDCVVDDDICYFVFLADCRDCPEFSIPKNYFGNCLASYIVVVKRDELIGKNGIVVAANGIERKIRDFKSDPLLGAESLMSDYRELSKSNKSILVVAGSPKLGVYETDFGWGKPNKSDLVHLSSSGSISLSDCRDGGSGIEVGLALQKIRMTNFINIFEEQVHNICSM 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02356 474 PANTHER - 10 473 - -
Car01g02356 474 Gene3D - 251 471 IPR023213 -
Car01g02356 474 Gene3D - 10 245 IPR023213 -
Car01g02356 474 Pfam Transferase family 24 465 - -
Car01g02356 474 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 10 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02356 Car-Chr1 49381420 49383084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02356 38 460 Monolignol Biosynthesis Gene Families AT5G48930 22.799 1.82e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02356 01 49381420 49383084 Car01g02356 01 49381420 49383084 ECH