Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02350 ATGGAGTTTGACCTTGAAAACCCTCTAGAAAATTTCCATGACCTTCCTTCTCATGGTGTTTCTTCTTTCTTCCTCATTGAATCTGACCACATCCCACCCCAAAATTACTTTCAAATTCTCAAATCTAACGATTTCGATATCTCACTTAGAAGTGATATCATCTCTTTAATCTCACATTTGTCCTGCACCTTCGATCCATTTGTGACTTACCTAGCTATCAACTATTTGGATCGCTTCCTCGCTAACCAAGGGATATTGCATCCAAAACCATGGGCCAACAAACTTCTTGCAGTAACTTGCTTCTCTCTAGCAGTAAAAATGTTGAAAACAGAGTACTCTGCCACTGATGTTCAGGCTCTTCTAAATAATGGTGATGGTGGTTTCATTTTTGAGACACAAACAATAAAAAGAATGGAAGCAGTTGTGTTAGGAGCACTACAATGGAGAATGCGTTCAATCACACCTTTCTCTTTCATTCCTTACTTCACCAATTTATTCAACCTTGATGATCAATCATTGAGAAAGGTTCTGAAAGATCGAGCATCTGAAATTATTTTTAAGTCACAAAATGATATAAAAGTTTTGGAATTCAAGCCATCTATTGTTGCTGCTTCATCTCTTCTTTATGCTTCACATGAGTTGTTTCCTTTTCAATATCCATGCTTCTTGGGAACAATATCCGATTGTTCATATGTAAATAAAGAAAGTGTTATGCAGTGCTATAATGTAATACAAGATATAGCTAAGGAGGAGTACGAATCTATGTTTAATGTGAATTCAAGTTCAGGCACACCAGTTAATGTGTTAGATGAACATTTTCTAAGCTTGGAAAGTGAATTAACAAACGGCACCAATGTTGCTTCTACTACTATGATACAACAAGAGAAGCATTTCAAGAGATGGAAAATTTAA 912 0.3596 MEFDLENPLENFHDLPSHGVSSFFLIESDHIPPQNYFQILKSNDFDISLRSDIISLISHLSCTFDPFVTYLAINYLDRFLANQGILHPKPWANKLLAVTCFSLAVKMLKTEYSATDVQALLNNGDGGFIFETQTIKRMEAVVLGALQWRMRSITPFSFIPYFTNLFNLDDQSLRKVLKDRASEIIFKSQNDIKVLEFKPSIVAASSLLYASHELFPFQYPCFLGTISDCSYVNKESVMQCYNVIQDIAKEEYESMFNVNSSSGTPVNVLDEHFLSLESELTNGTNVASTTMIQQEKHFKRWKI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02350 303 Pfam Cyclin, N-terminal domain 27 150 IPR006671 -
Car01g02350 303 SMART Cyclin_C_2 153 268 IPR004367 -
Car01g02350 303 Gene3D - 33 151 - -
Car01g02350 303 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 301 - -
Car01g02350 303 PANTHER CYCLINS 5 301 IPR039361 -
Car01g02350 303 CDD CYCLIN 53 143 IPR013763 -
Car01g02350 303 CDD CYCLIN 153 244 IPR013763 -
Car01g02350 303 Gene3D - 25 242 - -
Car01g02350 303 SUPERFAMILY Cyclin-like 135 249 IPR036915 -
Car01g02350 303 SMART cyclin_7 157 246 IPR013763 -
Car01g02350 303 SMART cyclin_7 51 144 IPR013763 -
Car01g02350 303 Pfam Cyclin, C-terminal domain 153 251 IPR004367 -
Car01g02350 303 SUPERFAMILY Cyclin-like 21 150 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02350 Car-Chr1 49313398 49316622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02350 1 301 Core Cell Cycle Gene Families AT4G03270 43.810 6.95e-76 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02350 K18812 - gmx:100799951 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02350 01 49313398 49316622 Car01g02350 01 49313398 49316622 ECH