Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02337 ATGCACGTCCACATGAAAGCTGAGTTAAATGGAACATCCATTTCCTTTCAAAACCCTACAACAATTTTCAACGCACACCAAACCACACCTCTTCCTCAACCAGAAGCACTTAAAGGTTGTCTTGGAAGCCTAGATGGAGCATGTATTGAAAAACTACTTCTCCATTGTGCAAGTGCTTTAGAAAGCAATGACACAACCTTAGCTCAACAAGTTATGTGGGTCCTCAACAATGTTGCATCACCATTAGGTGACACAAACCAAAGACTCACATCATGGTTCCTAAGAGCATTAATATCTAGAGCTTCAAAAATTTGTCCTACATCAATGAATTTCAAAGGAAGTACTAACAACAACATCATTCAAAGAAGGTTGATGTCGGCGACCGAACTAGCCGGGTATGTTGATTTAATTCCTTGGCATAGATTTGGTTTTTGTGCTTCCAACAATGAAATTTTCAAATCAATCAAGGGATTCAAAAGGGTACATATTTTAGATTTTAGCATAACACCTTGTATGCAATGGCCAACTTTTATTGATTCTTTGGCAAAAAGACAAGAAGGCCCTCCTTCACTTAGAATAACAGTTCCATCTTTTAGACCAATGGTTCCTCCTTTGGTTAATATATCAATACATGAAGTTGGTCAACGTTTAGGTAATTTTGCAAAATTTAAGGATGTCCCTTTTGAATTTAATGTTATTGGAGATACAATTTCATTGACAAATGAAGAATTGAGTAATATTGAATCAACAAGTTTTCATTTTGAAACAATGTTGAGTCTCTTGAATCCTAGTGTGTTAAATCTTAGGGAAGATGAAGCTTTGATTATAAATTGTCAAAATTGGCTACGTTATCTGTCTGATGATAGAAAGACTCAAAATATTTCGATTCGAGATGCTTTTATGAATCTAGTGAAAGGACTTAATCCTAGGATTGTACTTTTGGTTGATGAGGATTGTGATCTTAGTGCATCTAGTTTAACATCAAGAATTACTGCTTGTTTTAACCATTTATGGATACCCTTTGATGCATTGGACACTTTTTTGCCTAAAGATAGTTGTCAAAGGACAGAGTTTGAATCTGACATAGGACAGAAAATTGAGAACATTATAAGCTTTGAAGGGAATCAAAGAATTGAGAGGTTGGAGACAGGGATGCAAATGTCTCAAAGAATGAAAAATGTTGGTTACTTTAGTGTTCCATTTTGTGATGAAACTGTTGTGGAAGTTAAGGAATTGCTTGATGAACATGCTAGTGGATGGGGAATGAAAAGGGAAGAAAACATGTTGGTTCTTACATGGAAAGGAAATAGCTGTGTGTTTGCCACGGCTTGGGTCCCTTATGAAATTAGGGATTGCATCGTTACAGATCCAAGTATCTCTTAA 1383 0.3594 MHVHMKAELNGTSISFQNPTTIFNAHQTTPLPQPEALKGCLGSLDGACIEKLLLHCASALESNDTTLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASKICPTSMNFKGSTNNNIIQRRLMSATELAGYVDLIPWHRFGFCASNNEIFKSIKGFKRVHILDFSITPCMQWPTFIDSLAKRQEGPPSLRITVPSFRPMVPPLVNISIHEVGQRLGNFAKFKDVPFEFNVIGDTISLTNEELSNIESTSFHFETMLSLLNPSVLNLREDEALIINCQNWLRYLSDDRKTQNISIRDAFMNLVKGLNPRIVLLVDEDCDLSASSLTSRITACFNHLWIPFDALDTFLPKDSCQRTEFESDIGQKIENIISFEGNQRIERLETGMQMSQRMKNVGYFSVPFCDETVVEVKELLDEHASGWGMKREENMLVLTWKGNSCVFATAWVPYEIRDCIVTDPSIS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02337 460 PANTHER OS05G0500600 PROTEIN 6 446 - -
Car01g02337 460 ProSiteProfiles GRAS family profile. 40 445 IPR005202 -
Car01g02337 460 Pfam GRAS domain family 50 444 IPR005202 -
Car01g02337 460 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 446 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02337 Car-Chr1 49155702 49157787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02337 29 446 GRAS Transcription Factor Family AT3G49950 44.235 2.51e-118 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car01g02337 GRAS 6.3e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02337 - - gmx:100805056 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02337 01 49155702 49157787 Car01g02337 01 49155702 49157787 ECH