Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02335 ATGTTCTCCAACGAAACCACCACCTCCTCCTCCATAGACCCAATGTTCTCAACCTTCAGTCTCCAATCACTCCTCACATTCAACCCTTCCTTCTTCACCGACGCTACTTTCCACACTTTAACCGATTATCCTCCACTCCCTAACCTCCCTCAATCCACCACCGACCAAACTCCAAACCTcaacaacaacaacaacaacaacaaaaaacaTCTCCTAGTTATTCCAAAAACAGAACACCCTATGAACATCAATCATCTTCCTTCAATAGAACAACTTCTCCCACTTCAACAAAACCAACAACAACCATTCCATTTCTTCCCTAATAATTACTATCAACCCTTTCAATCTTTTCACTCTCTCCCTCAACTCCGTTCACCGGAACCCACTTTCTCCGACACAAAACGTCCCCGTCTTAATCTCACACCGGAAACCACTCCACCACCCTCTTCAGTTCGAGGAAAATCTCCCTTGATTCCTCAGAGCAACTTAGCCAGACAAAGAAGACAAAAGCTAAGCGAGAAAACGCGTTGTTTGCAGAAACTAATGCCATGGGATAAGAAAATGGATCAAGCTACTCTTTTAGAAGAAGCTTATAAATATGTTAAGTTTTTGCAGGCACAGTTCTCTGTTCTTCAATCAATGCCTTCTCACACAACCAACAACTATGGTTCCGGCGCCGGCGCCGGCGGTGGTGGTGTTTTTGCTGACTTGGAAAAGCTTAACAGAAACCAAGTGTTGCAGGTTCTTGTGAACTCACCGGTTGCACAGACGAAGCTTTATTCACAAGGTCACTGTGTTTTCTCCATGGAACAATTTTCTCTGCTCAGAAAATTATCAGAGAATAGACAACAACAACAGAATATGTCTGAGCATGATTCTTCCAGAACTTTCTTTCACTGA 900 0.4222 MFSNETTTSSSIDPMFSTFSLQSLLTFNPSFFTDATFHTLTDYPPLPNLPQSTTDQTPNLNNNNNNNKKHLLVIPKTEHPMNINHLPSIEQLLPLQQNQQQPFHFFPNNYYQPFQSFHSLPQLRSPEPTFSDTKRPRLNLTPETTPPPSSVRGKSPLIPQSNLARQRRQKLSEKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFSVLQSMPSHTTNNYGSGAGAGGGGVFADLEKLNRNQVLQVLVNSPVAQTKLYSQGHCVFSMEQFSLLRKLSENRQQQQNMSEHDSSRTFFH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02335 299 MobiDBLite consensus disorder prediction 280 299 - -
Car01g02335 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 218 IPR036638 GO:0046983
Car01g02335 299 MobiDBLite consensus disorder prediction 121 157 - -
Car01g02335 299 MobiDBLite consensus disorder prediction 43 66 - -
Car01g02335 299 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 3 294 IPR045843 GO:0003700|GO:0006355
Car01g02335 299 MobiDBLite consensus disorder prediction 45 66 - -
Car01g02335 299 Gene3D - 160 222 IPR036638 GO:0046983
Car01g02335 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Car01g02335 299 PANTHER TRANSCRIPTION FACTOR BHLH117 3 294 - -
Car01g02335 299 SMART finulus 161 210 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02335 Car-Chr1 49120649 49121548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02335 37 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 33.463 1.52e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car01g02335 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02335 - - cam:101498441 559.296