Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02328 ATGTCTCGGCCTCAGTGTAAAACATGTGTCTCTGAGGCAACGAAAGAAATCCAAAATATTTGCCCATACAACAAAGGTGCAATCATATGGTACGACTATTGTTTAGTCAAATACTTGGATACTAATTTCTTTGGCAAAATTGATGATACCAACAAGTTCTATATGTGGAATTTGAATAAAGTAAGTGACCCTAGCACGTTTAATTACAATACTAAAGTTTTATTGAGCCAGCTTGCACAAAAAGCTTCTATGAATCCTAAATTGTATGCAACGGGAGAGGTAAAGCTTGAGAATTCAAAGAAACTTTATGGGTTGACTCAATGCACTAGAGACATTTCTAGTGTAGATTGTAAGAAGTGTCTTGATGATGCAATTAGTGAACTTCCAAATTGTTGTGATGGAAAAGAAGGAGGGAGAGTTGTTGGGGGAAGTTGCAACTTTCGATATGAGATATACCCATTTGTCAAAGAATAG 474 0.3608 MSRPQCKTCVSEATKEIQNICPYNKGAIIWYDYCLVKYLDTNFFGKIDDTNKFYMWNLNKVSDPSTFNYNTKVLLSQLAQKASMNPKLYATGEVKLENSKKLYGLTQCTRDISSVDCKKCLDDAISELPNCCDGKEGGRVVGGSCNFRYEIYPFVKE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02328 157 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 2 156 - -
Car01g02328 157 Gene3D - 48 154 IPR038408 -
Car01g02328 157 Gene3D - 1 43 IPR038408 -
Car01g02328 157 ProSiteProfiles Gnk2-homologous domain profile. 49 154 IPR002902 -
Car01g02328 157 Pfam Salt stress response/antifungal 2 38 IPR002902 -
Car01g02328 157 Pfam Salt stress response/antifungal 60 151 IPR002902 -
Car01g02328 157 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 2 156 - -
Car01g02328 157 ProSiteProfiles Gnk2-homologous domain profile. 1 43 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02328 Car-Chr1 49084920 49085772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02328 5 156 Pollen Coat Proteome AT4G20670 47.799 3.04e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02328 - - gmx:100527155 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02328 01 49084920 49085772 Car01g02328 01 49084920 49085772 ECH